RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ST6GALNAC4Q9H4F1 302 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 SIX2Q9NPC8 291 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 AGPAT3Q9NRZ7 376 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 DMAC2Q9NW81 257 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 APEX2Q9UBZ4 518 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 PARP2Q9UGN5 583 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 KCNG1Q9UIX4 513 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 RASAL2Q9UJF2 1139 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 SALL4Q9UJQ4 1053 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 GGA2Q9UJY4 613 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 EXOC7Q9UPT5 735 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 USP20Q9Y2K6 914 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 UTP11Q9Y3A2 253 aaKnown RBP9.62□□□□□ -0.87
HDAC3-202ENST00000459727 ZNF536O15090 1300 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 SYNGAP1Q96PV0 1343 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ADAMTSL1Q8N6G6 1762 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ANKRD62A6NC57 917 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 FAM187AA6NFU0 413 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 TMCO5BA8MYB1 307 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 MYO1CO00159 1063 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 OPLAHO14841 1288 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC3-202ENST00000459727 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
HDAC3-202ENST00000459727 TGFB1I1O43294 461 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 CEP104O60308 925 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 EVI5O60447 810 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ZMYND10O75800 440 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 SLITRK3O94933 977 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 GDF11O95390 407 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 CFBP00751 764 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 HOXD13P35453 343 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 MAGEA9P43362 315 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 GYS2P54840 703 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 PSMC6P62333 389 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 CACNB1Q02641 598 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-202ENST00000459727 CYP4A11Q02928 519 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 BFSP1Q12934 665 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 DHX34Q14147 1143 aaKnown RBP9.61□□□□□ -0.87
HDAC3-202ENST00000459727 RASA3Q14644 834 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 KIF22Q14807 665 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ODR4Q5SWX8 454 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 C11orf63Q6NUN7 778 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 DPY19L2P1Q6NXN4 242 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 XRRA1Q6P2D8 792 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 LRRC31Q6UY01 552 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ZFPM1Q8IX07 1006 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 RTKN2Q8IZC4 609 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 SYCP3Q8IZU3 236 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 IQCKQ8N0W5 287 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 UBL4BQ8N7F7 174 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 MTMR14Q8NCE2 650 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 LPAR1Q92633 364 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 GJA10Q969M2 543 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 CCDC43Q96MW1 224 aaKnown RBP9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ACCSQ96QU6 501 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 PSMB7Q99436 277 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 PLVAPQ9BX97 442 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 TBC1D22BQ9NU19 505 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ZBTB21Q9ULJ3 1066 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 NOC2LQ9Y3T9 749 aaKnown RBP9.61□□□□□ -0.87
HDAC3-202ENST00000459727 ZMYM2Q9UBW7 1377 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 BRWD3Q6RI45 1802 aa9.61□□□□□ -0.87
HDAC3-202ENST00000459727 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 H0YCG3 227 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 IPO5O00410 1097 aaKnown RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 KRIT1O00522 736 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 EXOC3O60645 756 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 ICAM1P05362 532 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 P4HBP07237 508 aaKnown RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 GLI1P08151 1106 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 ASNSP08243 561 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 MYZAPP0CAP1 466 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 TNFAIP3P21580 790 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 SFNP31947 248 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 IRAK1P51617 712 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 HSD17B4P51659 736 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 JAK3P52333 1124 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 SLC7A5Q01650 507 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 HLTFQ14527 1009 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 DLGAP5Q15398 846 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 B3GNT9Q6UX72 402 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 HOOK3Q86VS8 718 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 GSPT2Q8IYD1 628 aaKnown RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 SLC30A5Q8TAD4 765 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 U2AF1L4Q8WU68 220 aaKnown RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 SEC14L1Q92503 715 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 HES6Q96HZ4 224 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 DYDC2Q96IM9 177 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 ATP6V1G3Q96LB4 118 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 MXRA8Q9BRK3 442 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 INTS2Q9H0H0 1204 aaKnown RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 TAOK3Q9H2K8 898 aa9.6□□□□□ -0.87
HDAC3-202ENST00000459727 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
HDAC3-202ENST00000459727 C17orf75Q9HAS0 396 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms