RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PAGR1Q9BTK6 254 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 TTYH3Q9C0H2 523 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 DHX33Q9H6R0 707 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 AZI2Q9H6S1 392 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 TMEM134Q9H6X4 195 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 TAB2Q9NYJ8 693 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 GABBR1Q9UBS5 961 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 FZD1Q9UP38 647 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 MAPK8IP1Q9UQF2 711 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 Q9Y3F1 56 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 BZW2Q9Y6E2 419 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 DOCK5Q9H7D0 1870 aa7.51□□□□□ -1.21
ECHDC1-210ENST00000454859 XRCC5P13010 732 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 GARTP22102 1010 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 UBA1P22314 1058 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 NAMPTP43490 491 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 TUBB4BP68371 445 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CETN1Q12798 172 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 MKRN4PQ13434 485 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 MXD4Q14582 209 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 TARBP2Q15633 366 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 SLFN12LQ6IEE8 588 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 ANO5Q75V66 913 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 PLEKHH3Q7Z736 793 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 MAP4K3Q8IVH8 894 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 DAW1Q8N136 415 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CALR3Q96L12 384 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CEP170P1Q96L14 293 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 FGD4Q96M96 766 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 C2orf40Q9H1Z8 148 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 VPS16Q9H269 839 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 TXNRD2Q9NNW7 524 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 LUC7LQ9NQ29 371 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 RRAGDQ9NQL2 400 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CEP72Q9P209 647 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 WRAP73Q9P2S5 460 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 SIK3Q9Y2K2 1263 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 ASTN1O14525 1302 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 PASKQ96RG2 1323 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CASP8AP2Q9UKL3 1982 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 MAGEB2O15479 319 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 TEX33O43247 280 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 HBP1O60381 514 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 AFPP02771 609 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 GYPCP04921 128 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CCDC175P0C221 793 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CCDC172P0C7W6 258 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 HOXD13P35453 343 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 STAT5BP51692 787 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 KRT83P78385 493 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 PRKCEQ02156 737 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 CNTN2Q02246 1040 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 RBL2Q08999 1139 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 PCBP1Q15365 356 aaKnown RBP eCLIP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 ZNF484Q5JVG2 852 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 C10orf76Q5T2E6 689 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 IER5Q5VY09 327 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 OLFML2BQ68BL8 750 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 SWSAP1Q6NVH7 229 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 RGMBQ6NW40 437 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 FAM43BQ6ZT52 329 aaPredicted RBP7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 TMEM139Q8IV31 216 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 EHBP1Q8NDI1 1231 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 TMC2Q8TDI7 906 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 SOCS4Q8WXH5 440 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 SLC7A3Q8WY07 619 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 BORCS6Q96GS4 357 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 NFKBIZQ9BYH8 718 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 PORCNQ9H237 461 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 ABHD16BQ9H3Z7 469 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 ZHX3Q9H4I2 956 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 MLXIPQ9HAP2 919 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 ABHD10Q9NUJ1 306 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 PLAGL2Q9UPG8 496 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 MGAMO43451 1857 aa7.5□□□□□ -1.21
ECHDC1-210ENST00000454859 NPHP3-ACAD11A0A0J9YXS1 232 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 GSTTP1A0A1W2PQM5 241 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 DDX39AO00148 427 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 BACH1O14867 736 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 TGFB1I1O43294 461 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 LDHAP00338 332 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 GH1P01241 217 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 RPLP2P05387 115 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 SLC10A3P09131 477 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 KRT13P13646 458 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 TRIM21P19474 475 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 CYLC1P35663 651 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 KYAT1Q16773 422 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 Q3C1V9 767 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 NYAP1Q6ZVC0 841 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 MOB2Q70IA6 237 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 HAUS6Q7Z4H7 955 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 RASAL3Q86YV0 1011 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 SYCP3Q8IZU3 236 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 NEK11Q8NG66 645 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 PPTC7Q8NI37 304 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 ATP8B4Q8TF62 1192 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 AGPAT3Q9NRZ7 376 aa7.49□□□□□ -1.21
ECHDC1-210ENST00000454859 ARHGAP28Q9P2N2 729 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms