RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 CD19P15391 556 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 SF3B3Q15393 1217 aaKnown RBP12.09□□□□□ -0.47
ZNF550-204ENST00000447310 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 CCHCR1Q8TD31 782 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 POMGNT1Q8WZA1 660 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 RGL1Q9NZL6 768 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 WTIPA6NIX2 430 aaPredicted RBP12.09□□□□□ -0.47
ZNF550-204ENST00000447310 NMT1P30419 496 aaKnown RBP12.09□□□□□ -0.47
ZNF550-204ENST00000447310 CACNB3P54284 484 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
ZNF550-204ENST00000447310 DAGLBQ8NCG7 672 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 ECT2Q9H8V3 914 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 ETNK1Q9HBU6 452 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 TXLNGQ9NUQ3 528 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 SUFUQ9UMX1 484 aa12.09□□□□□ -0.47
ZNF550-204ENST00000447310 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
ZNF550-204ENST00000447310 PALM3A6NDB9 673 aaPredicted RBP12.08□□□□□ -0.48
ZNF550-204ENST00000447310 TCP11X1B4DZS4 312 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 PDXKO00764 312 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 SMIM24O75264 130 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 MAN1A1P33908 653 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
ZNF550-204ENST00000447310 BFSP1Q12934 665 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 SLC29A2Q14542 456 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 CHURC1Q8WUH1 139 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 CCT8L1PA6NM43 557 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 RASA4BC9J798 803 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 RASA4O43374 803 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 KLRC4O43908 158 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 TPCN2Q8NHX9 752 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 C1orf54Q8WWF1 131 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 RILPQ96NA2 401 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 REEP2Q9BRK0 252 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 KCNQ2O43526 872 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 MYBP10242 640 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 DHX34Q14147 1143 aaKnown RBP12.08□□□□□ -0.48
ZNF550-204ENST00000447310 MEI1Q5TIA1 1274 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 INTS2Q9H0H0 1204 aaKnown RBP12.08□□□□□ -0.48
ZNF550-204ENST00000447310 VCPKMTQ9H867 229 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 ANAPC7Q9UJX3 599 aa12.08□□□□□ -0.48
ZNF550-204ENST00000447310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
ZNF550-204ENST00000447310 PDHBP11177 359 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 BMP3P12645 472 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 ERVK-9P63128 1117 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 EDRF1Q3B7T1 1238 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 RNF207Q6ZRF8 634 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 JAMLQ86YT9 394 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 CHORDC1Q9UHD1 332 aaPredicted RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 I3L4J1 428 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 BAG2O95816 211 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 ITGA4P13612 1032 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 KCNJ1P48048 391 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 SKOR1P84550 965 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 WDR78Q5VTH9 848 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 RSAD2Q8WXG1 361 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 VTI1AQ96AJ9 217 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 SPDL1Q96EA4 605 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 ACCSQ96QU6 501 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 GEMIN8Q9NWZ8 242 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 CNOT8Q9UFF9 292 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 CFAP73A6NFT4 308 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 ZNF233A6NK53 670 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 AP3B2Q13367 1082 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 KCTD19Q17RG1 926 aaPredicted RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 TRPM8Q7Z2W7 1104 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 SUGP1Q8IWZ8 645 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 TGS1Q96RS0 853 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 MRPL11Q9Y3B7 192 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 ABCB11O95342 1321 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 HNRNPDLO14979 420 aaKnown RBP12.07□□□□□ -0.48
ZNF550-204ENST00000447310 DIAPH2O60879 1101 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 LONRF1Q17RB8 773 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 TRIM59Q8IWR1 403 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 KIF2BQ8N4N8 673 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 CFAP61Q8NHU2 1237 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 IL17RBQ9NRM6 502 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 TXNDC16Q9P2K2 825 aa12.07□□□□□ -0.48
ZNF550-204ENST00000447310 LMTK3Q96Q04 1460 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 AGTP01019 485 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 EVX2Q03828 476 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 MIIPQ5JXC2 388 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 HP1BP3Q5SSJ5 553 aaPredicted RBP12.06□□□□□ -0.48
ZNF550-204ENST00000447310 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 ZNF571Q7Z3V5 609 aaPredicted RBP12.06□□□□□ -0.48
ZNF550-204ENST00000447310 ZNF564Q8TBZ8 553 aaPredicted RBP12.06□□□□□ -0.48
ZNF550-204ENST00000447310 DYDC2Q96IM9 177 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 FAM20AQ96MK3 541 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 DDX23Q9BUQ8 820 aaKnown RBP12.06□□□□□ -0.48
ZNF550-204ENST00000447310 TMEM206Q9H813 350 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 SUCLA2Q9P2R7 463 aaPredicted RBP12.06□□□□□ -0.48
ZNF550-204ENST00000447310 SIK3Q9Y2K2 1263 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 RIC1Q4ADV7 1423 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 SGK1O00141 431 aa12.06□□□□□ -0.48
ZNF550-204ENST00000447310 TXNDC9O14530 226 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms