RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 MAGEL2Q9UJ55 1249 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 PCSK5Q92824 1860 aa5.88□□□□□ -1.47
PTPN4-205ENST00000433888 A0A1W2PRX2 142 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 CYP27B1O15528 508 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 PEX11BO96011 259 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 KRT4P19013 534 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 RGS3P49796 1198 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 SESN2P58004 480 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-205ENST00000433888 INHBEP58166 350 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 SLC25A3Q00325 362 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 Q6ZRM9 215 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 LILRB2Q8N423 598 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-205ENST00000433888 SRPK1Q96SB4 655 aaKnown RBP5.87□□□□□ -1.47
PTPN4-205ENST00000433888 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
PTPN4-205ENST00000433888 SAE1Q9UBE0 346 aaPredicted RBP5.87□□□□□ -1.47
PTPN4-205ENST00000433888 DENND2AQ9ULE3 1009 aa5.87□□□□□ -1.47
PTPN4-205ENST00000433888 A0A087X1B8 175 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 TRAF5O00463 557 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 H2AFYO75367 372 aaKnown RBP5.86□□□□□ -1.47
PTPN4-205ENST00000433888 APPP05067 770 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 MAKP20794 623 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 SCNN1GP51170 649 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 SLC6A3Q01959 620 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 ARHGAP44Q17R89 818 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 C2orf27AQ580R0 203 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 ULK2Q8IYT8 1036 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 ANKRD35Q8N283 1001 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 GFM2Q969S9 779 aaKnown RBP5.86□□□□□ -1.47
PTPN4-205ENST00000433888 MAML3Q96JK9 1138 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 C16orf92Q96LL3 132 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 CLUHP3Q96NS8 147 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 HAPLN2Q9GZV7 340 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 SLC2A4RGQ9NR83 387 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 PARPBPQ9NWS1 579 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 PTCH2Q9Y6C5 1203 aa5.86□□□□□ -1.47
PTPN4-205ENST00000433888 PLD2O14939 933 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 ADH4P08319 380 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 DGKDQ16760 1214 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 GAREM2Q75VX8 874 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 CLEC14AQ86T13 490 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 E2F7Q96AV8 911 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 MIEF2Q96C03 454 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 CLIP3Q96DZ5 547 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 RPL10LQ96L21 214 aaKnown RBP5.85□□□□□ -1.47
PTPN4-205ENST00000433888 GPRC5BQ9NZH0 403 aa5.85□□□□□ -1.47
PTPN4-205ENST00000433888 XDHP47989 1333 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 M0R2C6 588 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 GLRX3O76003 335 aaKnown RBP5.84□□□□□ -1.47
PTPN4-205ENST00000433888 KIF11P52732 1056 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 BPIFB4P59827 614 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 ROM1Q03395 351 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 ZCCHC8Q6NZY4 707 aaKnown RBP5.84□□□□□ -1.47
PTPN4-205ENST00000433888 FAM111BQ6SJ93 734 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 OR5AN1Q8NGI8 311 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 AGAP2Q99490 1192 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 ACSS2Q9NR19 701 aa5.84□□□□□ -1.47
PTPN4-205ENST00000433888 RBM8AQ9Y5S9 174 aaKnown RBP5.84□□□□□ -1.47
PTPN4-205ENST00000433888 KRT37O76014 449 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 RABGGTBP53611 331 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 TCIRG1Q13488 830 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 TOB2Q14106 344 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-205ENST00000433888 GAGE13Q4V321 117 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 FNDC3BQ53EP0 1204 aaKnown RBP5.83□□□□□ -1.48
PTPN4-205ENST00000433888 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 ANKRD53Q8N9V6 530 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 CHST14Q8NCH0 376 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 KCMF1Q9P0J7 381 aa5.83□□□□□ -1.48
PTPN4-205ENST00000433888 UBA6A0AVT1 1052 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-205ENST00000433888 UBE2QL1A1L167 161 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 RAPGEF3O95398 923 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 KRTAP1-1Q07627 177 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 CRHR2Q13324 411 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 TTC38Q5R3I4 469 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 SOGA3Q5TF21 947 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 SLFN12LQ6IEE8 588 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 HTR3DQ70Z44 454 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 BMP8AQ7Z5Y6 402 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 DDX53Q86TM3 631 aaKnown RBP5.82□□□□□ -1.48
PTPN4-205ENST00000433888 PLA2G15Q8NCC3 412 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-205ENST00000433888 SAMD15Q9P1V8 674 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 DMRT1Q9Y5R6 373 aa5.82□□□□□ -1.48
PTPN4-205ENST00000433888 KLRG2A4D1S0 409 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-205ENST00000433888 DNAJC8O75937 253 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-205ENST00000433888 CYP17A1P05093 508 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 PTX3P26022 381 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-205ENST00000433888 IGFALSP35858 605 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 COL10A1Q03692 680 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 MYBPC3Q14896 1274 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 ELAVL1Q15717 326 aaKnown RBP5.81□□□□□ -1.48
PTPN4-205ENST00000433888 C1QL3Q5VWW1 255 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 KANSL1Q7Z3B3 1105 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 MRGPRGQ86SM5 289 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 PRRX2Q99811 253 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 TCF25Q9BQ70 676 aa5.81□□□□□ -1.48
PTPN4-205ENST00000433888 IL23AQ9NPF7 189 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms