RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
PTPRA-206ENST00000430705 GJD3Q8N144 294 aa18.33■□□□□ 0.52
PTPRA-206ENST00000430705 C1QTNF1Q9BXJ1 281 aa18.33■□□□□ 0.52
PTPRA-206ENST00000430705 NIFKQ9BYG3 293 aaKnown RBP18.33■□□□□ 0.52
PTPRA-206ENST00000430705 NRBP2Q9NSY0 501 aa18.33■□□□□ 0.52
PTPRA-206ENST00000430705 WRAP73Q9P2S5 460 aaPredicted RBP18.33■□□□□ 0.52
PTPRA-206ENST00000430705 SEPT9Q9UHD8 586 aaPredicted RBP18.33■□□□□ 0.52
PTPRA-206ENST00000430705 DDX25Q9UHL0 483 aaKnown RBP18.33■□□□□ 0.52
PTPRA-206ENST00000430705 FAM86C2PA6NEL3 165 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 PI4K2BG5E9Z4 385 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 CSDE1O75534 798 aaKnown RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 GLP2RO95838 553 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 FDPSP14324 419 aaKnown RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 ADAM15Q13444 863 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 PUS10Q3MIT2 529 aaKnown RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 MTERF2Q49AM1 385 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 ODR4Q5SWX8 454 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 FAM43BQ6ZT52 329 aaPredicted RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 ANO5Q75V66 913 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 COLGALT1Q8NBJ5 622 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 MSLNLQ96KJ4 702 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 CASD1Q96PB1 797 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 LRFN3Q9BTN0 628 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 IGFLR1Q9H665 355 aa18.32■□□□□ 0.52
PTPRA-206ENST00000430705 ELAC1Q9H777 363 aaKnown RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 TYW1Q9NV66 732 aaKnown RBP18.32■□□□□ 0.52
PTPRA-206ENST00000430705 C19orf67A6NJJ6 358 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 MBTPS2O43462 519 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 TBC1D8BQ0IIM8 1120 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 LETM2Q2VYF4 491 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 XKR3Q5GH77 459 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 CLLU1OSQ5K130 101 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 PLA2G4FQ68DD2 849 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
PTPRA-206ENST00000430705 HAS1Q92839 578 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 TNFRSF25Q93038 417 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
PTPRA-206ENST00000430705 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 CLEC1BQ9P126 229 aa18.31■□□□□ 0.52
PTPRA-206ENST00000430705 NCK2O43639 380 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 FGF18O76093 207 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 NEFLP07196 543 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 TMOD1P28289 359 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 ANAPC15P60006 121 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 ERVFC1P60507 584 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 RBM10P98175 930 aaKnown RBP18.3■□□□□ 0.52
PTPRA-206ENST00000430705 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 PPP2R5CQ13362 524 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 SMAD2Q15796 467 aaKnown RBP18.3■□□□□ 0.52
PTPRA-206ENST00000430705 NEK8Q86SG6 692 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 ZNF598Q86UK7 904 aaKnown RBP18.3■□□□□ 0.52
PTPRA-206ENST00000430705 ECHDC2Q86YB7 292 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 NECAB1Q8N987 351 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
PTPRA-206ENST00000430705 VN1R2Q8NFZ6 395 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 PPP4R2Q9NY27 417 aa18.3■□□□□ 0.52
PTPRA-206ENST00000430705 FSCN2O14926 492 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 MAFO75444 373 aaPredicted RBP18.29■□□□□ 0.52
PTPRA-206ENST00000430705 CDKL5O76039 1030 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 PBX3P40426 434 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 NRIP1P48552 1158 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 SPIRE1Q08AE8 756 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 ME3Q16798 604 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 PPP4R3AQ6IN85 833 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 EFHBQ8N7U6 833 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 NLRP7Q8WX94 980 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 TMEM117Q9H0C3 514 aa18.29■□□□□ 0.52
PTPRA-206ENST00000430705 A0A087WZ62 844 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 CCDC194A0A1B0GVG4 234 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 WNT7AO00755 349 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 NR5A1Q13285 461 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 SMAD4Q13485 552 aaKnown RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 SPOUT1Q5T280 376 aaKnown RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 RBM23Q86U06 439 aaKnown RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 KSR1Q8IVT5 923 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 ADHFE1Q8IWW8 467 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 GTF3C6Q969F1 213 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 FDXACB1Q9BRP7 624 aaPredicted RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 ORC3Q9UBD5 711 aaPredicted RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 PRKAG3Q9UGI9 489 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 BARX2Q9UMQ3 279 aaPredicted RBP18.28■□□□□ 0.52
PTPRA-206ENST00000430705 PCDHB12Q9Y5F1 795 aa18.28■□□□□ 0.52
PTPRA-206ENST00000430705 DDX11L8A8MPP1 907 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 GPR37L1O60883 481 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 EYA4O95677 639 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 NPEPPSP55786 919 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 PSMC5P62195 406 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 UBE3AQ05086 875 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 TMEM31Q5JXX7 168 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 ZNF710Q8N1W2 664 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 NSUN7Q8NE18 718 aaKnown RBP18.27■□□□□ 0.52
PTPRA-206ENST00000430705 FAM20AQ96MK3 541 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 TLR9Q9NR96 1032 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 CD207Q9UJ71 328 aa18.27■□□□□ 0.52
PTPRA-206ENST00000430705 A0A0U1RQF3 1178 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms