RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 BRAPQ7Z569 592 aa19.24■□□□□ 0.67
LMCD1-204ENST00000426878 ZNF410Q86VK4 478 aa19.24■□□□□ 0.67
LMCD1-204ENST00000426878 MYLIPQ8WY64 445 aa19.24■□□□□ 0.67
LMCD1-204ENST00000426878 PPP1R16BQ96T49 567 aa19.24■□□□□ 0.67
LMCD1-204ENST00000426878 STK24Q9Y6E0 443 aa19.24■□□□□ 0.67
LMCD1-204ENST00000426878 MED24O75448 989 aa19.23■□□□□ 0.67
LMCD1-204ENST00000426878 ARHGEF15O94989 841 aa19.23■□□□□ 0.67
LMCD1-204ENST00000426878 ATP2C1P98194 919 aaPredicted RBP19.23■□□□□ 0.67
LMCD1-204ENST00000426878 NACC1Q96RE7 527 aa19.23■□□□□ 0.67
LMCD1-204ENST00000426878 RAB34Q9BZG1 259 aa19.23■□□□□ 0.67
LMCD1-204ENST00000426878 DBR1Q9UK59 544 aaKnown RBP19.23■□□□□ 0.67
LMCD1-204ENST00000426878 ARID2Q68CP9 1835 aa19.23■□□□□ 0.67
LMCD1-204ENST00000426878 EYSQ5T1H1 3165 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 LINC01553A4QN01 128 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 UPP2O95045 317 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 RARRES1P49788 294 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 DSC3Q14574 896 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 EMC2Q15006 297 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 HAUS3Q68CZ6 603 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 RHPN2Q8IUC4 686 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 TCP11Q8WWU5 503 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 NLRP7Q8WX94 980 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 PSPC1Q8WXF1 523 aaKnown RBP19.22■□□□□ 0.67
LMCD1-204ENST00000426878 YME1L1Q96TA2 773 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 GCOM2Q9BZD3 368 aaPredicted RBP19.22■□□□□ 0.67
LMCD1-204ENST00000426878 PRDM12Q9H4Q4 367 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 RGS18Q9NS28 235 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 C1orf112Q9NSG2 853 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 LRWD1Q9UFC0 647 aa19.22■□□□□ 0.67
LMCD1-204ENST00000426878 ASAP2O43150 1006 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 MGEA5O60502 916 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 DGAT1O75907 488 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 SYT1P21579 422 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 IL17AQ16552 155 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 ARL6IP4Q66PJ3 421 aaKnown RBP19.21■□□□□ 0.67
LMCD1-204ENST00000426878 DTHD1Q6ZMT9 781 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 NPAS4Q8IUM7 802 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 PIGOQ8TEQ8 1089 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 PRPF31Q8WWY3 499 aaKnown RBP19.21■□□□□ 0.67
LMCD1-204ENST00000426878 SCLT1Q96NL6 688 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 GAS2L1Q99501 681 aaPredicted RBP19.21■□□□□ 0.67
LMCD1-204ENST00000426878 INO80BQ9C086 356 aaPredicted RBP19.21■□□□□ 0.67
LMCD1-204ENST00000426878 RC3H2Q9HBD1 1191 aaKnown RBP19.21■□□□□ 0.67
LMCD1-204ENST00000426878 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
LMCD1-204ENST00000426878 COL4A3BPQ9Y5P4 624 aa19.21■□□□□ 0.67
LMCD1-204ENST00000426878 A0A087WZ62 844 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 STAG3L1P0CL83 205 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 FOSL2P15408 326 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 SARSP49591 514 aaKnown RBP19.2■□□□□ 0.66
LMCD1-204ENST00000426878 ERVK-21P61565 698 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 FAM189BP81408 668 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 SLC24A5Q71RS6 500 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 TMEM143Q96AN5 459 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 ZNF689Q96CS4 500 aaPredicted RBP19.2■□□□□ 0.66
LMCD1-204ENST00000426878 ZNF668Q96K58 619 aaPredicted RBP19.2■□□□□ 0.66
LMCD1-204ENST00000426878 TGS1Q96RS0 853 aaKnown RBP19.2■□□□□ 0.66
LMCD1-204ENST00000426878 MTRQ99707 1265 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 ADAM2Q99965 735 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 FDXACB1Q9BRP7 624 aaPredicted RBP19.2■□□□□ 0.66
LMCD1-204ENST00000426878 XPNPEP1Q9NQW7 623 aa19.2■□□□□ 0.66
LMCD1-204ENST00000426878 DENND3A2RUS2 1198 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 VPS37CA5D8V6 355 aaPredicted RBP19.19■□□□□ 0.66
LMCD1-204ENST00000426878 C9IYK1 514 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 DGKIO75912 1065 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 LAMTOR4Q0VGL1 99 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 MXD4Q14582 209 aaPredicted RBP19.19■□□□□ 0.66
LMCD1-204ENST00000426878 POTEGQ6S5H5 508 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 CCDC43Q96MW1 224 aaKnown RBP19.19■□□□□ 0.66
LMCD1-204ENST00000426878 ATP6V0A4Q9HBG4 840 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 IFT122Q9HBG6 1241 aa19.19■□□□□ 0.66
LMCD1-204ENST00000426878 BMP15O95972 392 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 POU3F3P20264 500 aaPredicted RBP19.18■□□□□ 0.66
LMCD1-204ENST00000426878 CCT6AP40227 531 aaKnown RBP19.18■□□□□ 0.66
LMCD1-204ENST00000426878 POU5F1BQ06416 359 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 ADGRE1Q14246 886 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 KSR1Q8IVT5 923 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 NLRP4Q96MN2 994 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 SAMD11Q96NU1 681 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 CHST12Q9NRB3 414 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 PRUNE2Q8WUY3 3088 aa19.18■□□□□ 0.66
LMCD1-204ENST00000426878 ZSCAN20P17040 1043 aaPredicted RBP19.17■□□□□ 0.66
LMCD1-204ENST00000426878 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
LMCD1-204ENST00000426878 ARL2P36404 184 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 ECM1Q16610 540 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 SPRED2Q7Z698 418 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 SRGAP1Q7Z6B7 1085 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 ARNTL2Q8WYA1 636 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 ELAC1Q9H777 363 aaKnown RBP19.17■□□□□ 0.66
LMCD1-204ENST00000426878 CERS4Q9HA82 394 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 BMP2KQ9NSY1 1161 aaPredicted RBP19.17■□□□□ 0.66
LMCD1-204ENST00000426878 ADGRA3Q8IWK6 1321 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 A0A087WWV3 80 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 EPOPA6NHQ4 379 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 CSDE1O75534 798 aaKnown RBP19.17■□□□□ 0.66
LMCD1-204ENST00000426878 KRT79Q5XKE5 535 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 FIBCD1Q8N539 461 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 KCTD17Q8N5Z5 321 aa19.17■□□□□ 0.66
LMCD1-204ENST00000426878 MCPH1Q8NEM0 835 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms