RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RAD54LQ92698 747 aa27.21■■□□□ 1.95
VEGFA-209ENST00000425836 GINS2Q9Y248 185 aa27.21■■□□□ 1.95
VEGFA-209ENST00000425836 LTBP2Q14767 1821 aa27.2■■□□□ 1.95
VEGFA-209ENST00000425836 CXCL10P02778 98 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 SSBP05455 408 aaKnown RBP eCLIP27.2■■□□□ 1.94
VEGFA-209ENST00000425836 ARL2P36404 184 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 NAALADL2Q58DX5 795 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 FBXO47Q5MNV8 452 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 CCDC73Q6ZRK6 1079 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 C1orf186Q6ZWK4 172 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 RHPN2Q8IUC4 686 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 ZNF710Q8N1W2 664 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 PSPC1Q8WXF1 523 aaKnown RBP27.2■■□□□ 1.94
VEGFA-209ENST00000425836 ZNF668Q96K58 619 aaPredicted RBP27.2■■□□□ 1.94
VEGFA-209ENST00000425836 RUSC1Q9BVN2 902 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 GPRC5CQ9NQ84 441 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 PDE4DIPQ5VU43 2346 aa27.2■■□□□ 1.94
VEGFA-209ENST00000425836 CRYBB1P53674 252 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-209ENST00000425836 CDC42EP1Q00587 391 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 MCM6Q14566 821 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 KSR1Q8IVT5 923 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 PDILTQ8N807 584 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 FAM13BQ9NYF5 915 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 STK17AQ9UEE5 414 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 COL4A3BPQ9Y5P4 624 aa27.19■■□□□ 1.94
VEGFA-209ENST00000425836 GHRP10912 638 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 CMA1P23946 247 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 LAMTOR4Q0VGL1 99 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 LPIN1Q14693 890 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 FAM102BQ5T8I3 360 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 PRPF38BQ5VTL8 546 aaKnown RBP27.18■■□□□ 1.94
VEGFA-209ENST00000425836 LARP4BQ92615 738 aaKnown RBP27.18■■□□□ 1.94
VEGFA-209ENST00000425836 OSMRQ99650 979 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 UBE2OQ9C0C9 1292 aaKnown RBP27.18■■□□□ 1.94
VEGFA-209ENST00000425836 PFKMP08237 780 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 ASAP3Q8TDY4 903 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 TMEM40Q8WWA1 233 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 POLR3FQ9H1D9 316 aaPredicted RBP27.18■■□□□ 1.94
VEGFA-209ENST00000425836 POLD4Q9HCU8 107 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 SQORQ9Y6N5 450 aa27.18■■□□□ 1.94
VEGFA-209ENST00000425836 ASAP2O43150 1006 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 BMP8BP34820 402 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 STAT6P42226 847 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 DHX8Q14562 1220 aaKnown RBP27.17■■□□□ 1.94
VEGFA-209ENST00000425836 TMEM240Q5SV17 173 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 CHRDL2Q6WN34 429 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 NLRP7Q8WX94 980 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 PRO3102Q9H379 93 aa27.17■■□□□ 1.94
VEGFA-209ENST00000425836 A0A1W2PQ27 194 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 A0A1W2PQ64 194 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 A0A1W2PQD8 194 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 GUCY2CP25092 1073 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 MXD4Q14582 209 aaPredicted RBP27.16■■□□□ 1.94
VEGFA-209ENST00000425836 E2F4Q16254 413 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 PLEKHG4Q58EX7 1191 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 ARSHQ5FYA8 562 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 ZNF365Q70YC5 407 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 NLRP4Q96MN2 994 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 SCLT1Q96NL6 688 aa27.16■■□□□ 1.94
VEGFA-209ENST00000425836 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.16■■□□□ 1.941e-12■■■□□ 14.7
VEGFA-209ENST00000425836 AGO3Q9H9G7 860 aaKnown RBP27.16■■□□□ 1.94
VEGFA-209ENST00000425836 A0A087WZ62 844 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 GLRA2P23416 452 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 TCTN1Q2MV58 587 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 TSHZ1Q6ZSZ6 1077 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 ZNF410Q86VK4 478 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 GPBP1Q86WP2 473 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 USP38Q8NB14 1042 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 DBF4BQ8NFT6 615 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 FDXACB1Q9BRP7 624 aaPredicted RBP27.15■■□□□ 1.94
VEGFA-209ENST00000425836 KCND2Q9NZV8 630 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 KCNH3Q9ULD8 1083 aa27.15■■□□□ 1.94
VEGFA-209ENST00000425836 NOC2LQ9Y3T9 749 aaKnown RBP27.15■■□□□ 1.94
VEGFA-209ENST00000425836 A0A1B0GVL5 298 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 POLR2DO15514 142 aaKnown RBP27.14■■□□□ 1.94
VEGFA-209ENST00000425836 FGBP02675 491 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 SRGAP2CP0DJJ0 459 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 DARSP14868 501 aaKnown RBP27.14■■□□□ 1.94
VEGFA-209ENST00000425836 TPRNQ4KMQ1 711 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 PSRC1Q6PGN9 363 aaPredicted RBP27.14■■□□□ 1.94
VEGFA-209ENST00000425836 IQUBQ8NA54 791 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 DHX58Q96C10 678 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 IFT122Q9HBG6 1241 aa27.14■■□□□ 1.94
VEGFA-209ENST00000425836 ARID2Q68CP9 1835 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 NPHP3-ACAD11A0A0J9YXS1 232 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 HIP1RO75146 1068 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 EIF4BP23588 611 aaKnown RBP27.14■■□□□ 1.93
VEGFA-209ENST00000425836 CD52P31358 61 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 RAD51AP2Q09MP3 1159 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 C9orf50Q5SZB4 431 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 DAW1Q8N136 415 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 RNF149Q8NC42 400 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 KIFAP3Q92845 792 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 TIPINQ9BVW5 301 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 IFIH1Q9BYX4 1025 aaKnown RBP27.14■■□□□ 1.93
VEGFA-209ENST00000425836 GCOM2Q9BZD3 368 aaPredicted RBP27.14■■□□□ 1.93
VEGFA-209ENST00000425836 HPSEQ9Y251 543 aa27.14■■□□□ 1.93
VEGFA-209ENST00000425836 TANC1Q9C0D5 1861 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 FAM237AA0A1B0GTK4 181 aa27.13■■□□□ 1.93
VEGFA-209ENST00000425836 PFKFB1P16118 471 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms