RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 EYA4O95677 639 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 ECE1P42892 770 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 C10orf76Q5T2E6 689 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 B3GNT9Q6UX72 402 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 CNPY4Q8N129 248 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 EIF1ADQ8N9N8 165 aaKnown RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 PRPF38AQ8NAV1 312 aaKnown RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 CALR3Q96L12 384 aaKnown RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 SPAG5Q96R06 1193 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 THAP2Q9H0W7 228 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 TP73O15350 636 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 KRT18P05783 430 aaKnown RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 CYP3A4P08684 503 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 UBXN2AP68543 259 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 ZNF211Q13398 564 aaPredicted RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 CERKLQ49MI3 558 aaPredicted RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 ICE2Q659A1 982 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 LRIG3Q6UXM1 1119 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 ADAT2Q7Z6V5 191 aaKnown RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 GLG1Q92896 1179 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 PCNTO95613 3336 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 GTPBP10A4D1E9 387 aaKnown RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 HPDP32754 393 aaPredicted RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 FMO5P49326 533 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
SS18-203ENST00000415083 SLC15A2Q16348 729 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 TTC27Q6P3X3 843 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 KIAA0825Q8IV33 1275 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 SPICE1Q8N0Z3 855 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 KRT35Q92764 455 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
SS18-203ENST00000415083 WDR81Q562E7 1941 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 TCRBV7S2A1N4TA0A589 114 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 ANKRD63C9JTQ0 380 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DNM1LO00429 736 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 KRIT1O00522 736 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 MEFVO15553 781 aaPredicted RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 ERLIN2O94905 339 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 SOX5P35711 763 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 ZNF131P52739 623 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 TNNC1P63316 161 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 TCERG1LQ5VWI1 586 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 ZNF720Q7Z2F6 126 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 GMCL1P1Q8NEA9 526 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 RNF25Q96BH1 459 aaPredicted RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 IDI2Q9BXS1 227 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DPH5Q9H2P9 285 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 ACP6Q9NPH0 428 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DDX20Q9UHI6 824 aaKnown RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 TTC7AQ9ULT0 858 aaPredicted RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 HMGB1P1B2RPK0 211 aaPredicted RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 TRAPPC3O43617 180 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 CALUO43852 315 aaPredicted RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 FSBPO95073 299 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 VCAM1P19320 739 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 PTGIRP43119 386 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DACT2Q5SW24 774 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DUPD1Q68J44 220 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 BTNL9Q6UXG8 535 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 PEX26Q7Z412 305 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 ARHGEF19Q8IW93 802 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 SUGP1Q8IWZ8 645 aaKnown RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 MDM1Q8TC05 714 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 KAT5Q92993 513 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 TEKT1Q969V4 418 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 TLCD1Q96CP7 247 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 GMCL1Q96IK5 515 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 AMNQ9BXJ7 453 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 DNAJC12Q9UKB3 198 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 RABGAP1Q9Y3P9 1069 aa10.73□□□□□ -0.69
SS18-203ENST00000415083 BZW2Q9Y6E2 419 aaKnown RBP10.73□□□□□ -0.69
SS18-203ENST00000415083 FOXN3O00409 490 aaPredicted RBP10.72□□□□□ -0.69
SS18-203ENST00000415083 FGGP02679 453 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 H2AFZP0C0S5 128 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 GUCY2CP25092 1073 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 NPEPPSP55786 919 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 ICA1Q05084 483 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 CUL1Q13616 776 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 NFIL3Q16649 462 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 H2AFVQ71UI9 128 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 MAATS1Q7Z4T9 603 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 FBXO11Q86XK2 927 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 CYFIP2Q96F07 1278 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 FAM20AQ96MK3 541 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 AGPAT3Q9NRZ7 376 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 GRHL1Q9NZI5 618 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 TMOD4Q9NZQ9 345 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 ONECUT3O60422 494 aaPredicted RBP10.72□□□□□ -0.69
SS18-203ENST00000415083 PPFIA2O75334 1257 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 FAM107AO95990 144 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 ARP10275 920 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 ABCB4P21439 1286 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 HLTFQ14527 1009 aaKnown RBP eCLIP10.72□□□□□ -0.69
SS18-203ENST00000415083 FAM186BQ8IYM0 893 aa10.72□□□□□ -0.69
SS18-203ENST00000415083 ACER1Q8TDN7 264 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms