RNA–Protein interactions for RNA: ENST00000413963.2

AP001888.1-201, humanhuman

BASIC

Gene AP001888.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001888.1-201ENST00000413963 CCDC65Q8IXS2 484 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 KIAA0319LQ8IZA0 1049 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 LINC01465Q8N7H1 131 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 SLC17A8Q8NDX2 589 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 DNAJB3Q8WWF6 145 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 DDX12PQ92771 950 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 TMEM143Q96AN5 459 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 RUSC1Q9BVN2 902 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 FAM49AQ9H0Q0 323 aaPredicted RBP11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 DACT1Q9NYF0 836 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 COL4A3BPQ9Y5P4 624 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
AP001888.1-201ENST00000413963 MYMKA6NI61 221 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 H0YCG3 227 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 EVI5O60447 810 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 HIP1RO75146 1068 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 FAM13AO94988 1023 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 GAP43P17677 238 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 ARL2P36404 184 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 THPOP40225 353 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 AFMP43652 599 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 SMTNP53814 917 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 RBL2Q08999 1139 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 GIT2Q14161 759 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 RUFY4Q6ZNE9 571 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 MAEAQ7L5Y9 396 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 DYMQ7RTS9 669 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 ZNF410Q86VK4 478 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 RHPN2Q8IUC4 686 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 LRRC15Q8TF66 581 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 PRPF31Q8WWY3 499 aaKnown RBP11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 REEP2Q9BRK0 252 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 TRIM9Q9C026 710 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 INO80BQ9C086 356 aaPredicted RBP11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 POLR3FQ9H1D9 316 aaPredicted RBP11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 HIPK3Q9H422 1215 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 PARVGQ9HBI0 331 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 XPNPEP1Q9NQW7 623 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 SEL1LQ9UBV2 794 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 EVPLQ92817 2033 aa11.85□□□□□ -0.51
AP001888.1-201ENST00000413963 PVALEFA0A1B0GWK0 134 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 KIAA0355O15063 1070 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 SMC2O95347 1197 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 CKBP12277 381 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 IDEP14735 1019 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 NAMPTP43490 491 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 PHKA2P46019 1235 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 ASIC1P78348 528 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 MRPS6P82932 125 aaKnown RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 POU5F1BQ06416 359 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 LAMTOR4Q0VGL1 99 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 POSTNQ15063 836 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 SKOR2Q2VWA4 1001 aaPredicted RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 FAM26DQ5JW98 314 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 ODR4Q5SWX8 454 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 MYCT1Q8N699 235 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 STAMQ92783 540 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 DPF3Q92784 378 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 SCLT1Q96NL6 688 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 CTAGE1Q96RT6 745 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 CELF4Q9BZC1 486 aaKnown RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 C2orf40Q9H1Z8 148 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 ZHX3Q9H4I2 956 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 NR2E3Q9Y5X4 410 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 SQORQ9Y6N5 450 aa11.84□□□□□ -0.51
AP001888.1-201ENST00000413963 DNAH12Q6ZR08 3092 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 VTNP04004 478 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 SRGAP2CP0DJJ0 459 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 MAPTP10636 758 aaKnown RBP11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 PLS3P13797 630 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 RAG1P15918 1043 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 SELPP16109 830 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 GPC3P51654 580 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 ZNF131P52739 623 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 EFNA5P52803 228 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 NLRP11P59045 1033 aaKnown RBP11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 DRP2Q13474 957 aa11.83□□□□□ -0.52
AP001888.1-201ENST00000413963 PCBP1Q15365 356 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms