RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 TMOD1P28289 359 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 CASP1P29466 404 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 ARL2P36404 184 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 SARSP49591 514 aaKnown RBP22.68■■□□□ 1.22
VSX1-203ENST00000409285 DNM2P50570 870 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 MKRN4PQ13434 485 aaPredicted RBP22.68■■□□□ 1.22
VSX1-203ENST00000409285 KCNB1Q14721 858 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 EFCAB12Q6NXP0 572 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 RPAINQ86UA6 219 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 SERINC5Q86VE9 423 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 DIS3LQ8TF46 1054 aaKnown RBP22.68■■□□□ 1.22
VSX1-203ENST00000409285 CTAGE1Q96RT6 745 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 SENP6Q9GZR1 1112 aaPredicted RBP22.68■■□□□ 1.22
VSX1-203ENST00000409285 KIAA1468Q9P260 1216 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 SEL1LQ9UBV2 794 aa22.68■■□□□ 1.22
VSX1-203ENST00000409285 RPN1P04843 607 aaKnown RBP22.67■■□□□ 1.22
VSX1-203ENST00000409285 RAD51AP2Q09MP3 1159 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 CCDC65Q8IXS2 484 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 ZNF710Q8N1W2 664 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 C11orf49Q9H6J7 331 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 PARVGQ9HBI0 331 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 OLFML3Q9NRN5 406 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 PCDHA5Q9Y5H7 936 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 COL4A3BPQ9Y5P4 624 aa22.67■■□□□ 1.22
VSX1-203ENST00000409285 RSPH10B2B2RC85 870 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 RSPH10BP0C881 870 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 RGS19P49795 217 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 MXD4Q14582 209 aaPredicted RBP22.66■■□□□ 1.22
VSX1-203ENST00000409285 FAM102BQ5T8I3 360 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 SLC39A5Q6ZMH5 540 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 ANKRD33Q7Z3H0 272 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 NECAB2Q7Z6G3 386 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 PPP1R13LQ8WUF5 828 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 PSPC1Q8WXF1 523 aaKnown RBP22.66■■□□□ 1.22
VSX1-203ENST00000409285 SMARCE1Q969G3 411 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 PAWRQ96IZ0 340 aaKnown RBP22.66■■□□□ 1.22
VSX1-203ENST00000409285 POLR3FQ9H1D9 316 aaPredicted RBP22.66■■□□□ 1.22
VSX1-203ENST00000409285 GPRC5CQ9NQ84 441 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 RMND1Q9NWS8 449 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 LARSQ9P2J5 1176 aaKnown RBP22.66■■□□□ 1.22
VSX1-203ENST00000409285 KCNG1Q9UIX4 513 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.66■■□□□ 1.22
VSX1-203ENST00000409285 RHOBTB3O94955 611 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 FAM13AO94988 1023 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 CYP2C9P11712 490 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 PLS3P13797 630 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 DRP2Q13474 957 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 PTGISQ16647 500 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 FAM126BQ8IXS8 530 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 KIAA0319LQ8IZA0 1049 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 LRRC71Q8N4P6 559 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 METTL13Q8N6R0 699 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 KCNN1Q92952 543 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 TMEM143Q96AN5 459 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 TOX2Q96NM4 488 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 MAP7D2Q96T17 732 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 SUGCTQ9HAC7 445 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 PANK4Q9NVE7 773 aa22.66■■□□□ 1.22
VSX1-203ENST00000409285 ASAP2O43150 1006 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 LETM1O95202 739 aaPredicted RBP22.65■■□□□ 1.22
VSX1-203ENST00000409285 IDEP14735 1019 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 CLCN3P51790 818 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 ZNF200P98182 395 aaPredicted RBP22.65■■□□□ 1.22
VSX1-203ENST00000409285 CDC42EP1Q00587 391 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 CACNB1Q02641 598 aaPredicted RBP22.65■■□□□ 1.22
VSX1-203ENST00000409285 COASYQ13057 564 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 PTK7Q13308 1070 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 PPP2R5AQ15172 486 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 NME8Q8N427 588 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 TRIML1Q8N9V2 468 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 CCDC47Q96A33 483 aaKnown RBP22.65■■□□□ 1.22
VSX1-203ENST00000409285 ZBTB10Q96DT7 871 aa22.65■■□□□ 1.22
VSX1-203ENST00000409285 NTPCRQ9BSD7 190 aaKnown RBP22.65■■□□□ 1.22
VSX1-203ENST00000409285 GTPBP4Q9BZE4 634 aaKnown RBP22.65■■□□□ 1.22
VSX1-203ENST00000409285 B4GALT4O60513 344 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 CAND2O75155 1236 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 CD4P01730 458 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 MAPTP10636 758 aaKnown RBP22.64■■□□□ 1.21
VSX1-203ENST00000409285 SCP2P22307 547 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 GLRA2P23416 452 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 POU5F1BQ06416 359 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 PSMD2Q13200 908 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 DMP1Q13316 513 aaPredicted RBP22.64■■□□□ 1.21
VSX1-203ENST00000409285 KMT5BQ4FZB7 885 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 RUFY4Q6ZNE9 571 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 MAEAQ7L5Y9 396 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 SLC17A8Q8NDX2 589 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 SPIRE2Q8WWL2 714 aa22.64■■□□□ 1.21
VSX1-203ENST00000409285 PRPF31Q8WWY3 499 aaKnown RBP22.64■■□□□ 1.21
VSX1-203ENST00000409285 TRMT13Q9NUP7 481 aaKnown RBP22.64■■□□□ 1.21
VSX1-203ENST00000409285 SUCLA2Q9P2R7 463 aaPredicted RBP22.64■■□□□ 1.21
VSX1-203ENST00000409285 NAMPTP43490 491 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 RBL2Q08999 1139 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 ERCC4Q92889 916 aaPredicted RBP22.63■■□□□ 1.21
VSX1-203ENST00000409285 IFT74Q96LB3 600 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 FIZ1Q96SL8 496 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 NFKBIZQ9BYH8 718 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 ST6GALNAC4Q9H4F1 302 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 EXOC1Q9NV70 894 aa22.63■■□□□ 1.21
VSX1-203ENST00000409285 LAMTOR4Q0VGL1 99 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms