RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 VAV3Q9UKW4 847 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 NCOR1O75376 2440 aa10.18□□□□□ -0.78
SNORD88A-201ENST00000408314 LOXHD1Q8IVV2 1947 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 C9IYK1 514 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 EDIL3O43854 480 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 DARSP14868 501 aaKnown RBP10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 LAG3P18627 525 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 PPM1AP35813 382 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 RAB27AP51159 221 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 GNL2Q13823 731 aaKnown RBP10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 CALCRLQ16602 461 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 LEXMQ3ZCV2 418 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 NCAPH2Q6IBW4 605 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 RTN4RL1Q86UN2 441 aaPredicted RBP10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 C4orf19Q8IY42 314 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 CRIPAKQ8N1N5 446 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 LRRC43Q8N309 656 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 FAM184AQ8NB25 1140 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 PABPC5Q96DU9 382 aaKnown RBP10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 PPP1R16BQ96T49 567 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 LXNQ9BS40 222 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 MRPL9Q9BYD2 267 aaKnown RBP10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 TMEM117Q9H0C3 514 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 ADAMTS10Q9H324 1103 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 CYP26B1Q9NR63 512 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 CHST12Q9NRB3 414 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 MRPL42Q9Y6G3 142 aaKnown RBP10.17□□□□□ -0.78
SNORD88A-201ENST00000408314 IGKV6-21A0A0C4DH24 114 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 TBKBP1A7MCY6 615 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 ASAP2O43150 1006 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 ST18O60284 1047 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 LARGE1O95461 756 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 EOMESO95936 686 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 SRGAP2BP0DMP2 458 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 BMP1P13497 986 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 FDPSP14324 419 aaKnown RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 IBSPP21815 317 aaPredicted RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 FAM189BP81408 668 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 TFF2Q03403 129 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 NR5A1Q13285 461 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 DSC3Q14574 896 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 PCBP1Q15365 356 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 PAN2Q504Q3 1202 aaKnown RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 PDE12Q6L8Q7 609 aaKnown RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 POTEDQ86YR6 584 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 OXER1Q8TDS5 423 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 PSPC1Q8WXF1 523 aaKnown RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 GJA10Q969M2 543 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 C8orf76Q96K31 380 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 CEP170P1Q96L14 293 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 SUCLA2Q9P2R7 463 aaPredicted RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 NOL7Q9UMY1 257 aaKnown RBP10.16□□□□□ -0.78
SNORD88A-201ENST00000408314 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 A0A0U1RQF3 1178 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 EML1O00423 815 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 MGEA5O60502 916 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 KCNA5P22460 613 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 YWHABP31946 246 aaKnown RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 KCNQ1P51787 676 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 NCBP1Q09161 790 aaKnown RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 TFDP1Q14186 410 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 BMS1Q14692 1282 aaKnown RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 RABEP1Q15276 862 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 XKR9Q5GH70 373 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 TCEAL5Q5H9L2 206 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 ANO5Q75V66 913 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 CATSPER4Q7RTX7 472 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 SRGAP1Q7Z6B7 1085 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 THNSL1Q8IYQ7 743 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 ERMNQ8TAM6 284 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 TRAIPQ9BWF2 469 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 PUF60Q9UHX1 559 aaKnown RBP10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 PLAGL2Q9UPG8 496 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 COL4A3BPQ9Y5P4 624 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 STK24Q9Y6E0 443 aa10.15□□□□□ -0.78
SNORD88A-201ENST00000408314 BTBD18B2RXH4 712 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 GRM6O15303 877 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 JAK2O60674 1132 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 DGAT1O75907 488 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 STBD1O95210 358 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 LYPLA2O95372 231 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 LINC00271P0C7V0 271 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 PHKA2P46019 1235 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 TRAPPC10P48553 1259 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 RBM25P49756 843 aaKnown RBP10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 KRT17Q04695 432 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 MXD4Q14582 209 aaPredicted RBP10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 COL19A1Q14993 1142 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 EMC2Q15006 297 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 PLA2G4FQ68DD2 849 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 TWF2Q6IBS0 349 aaKnown RBP10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 EP400NLQ6ZTU2 488 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 ECHDC2Q86YB7 292 aa10.14□□□□□ -0.79
SNORD88A-201ENST00000408314 CCDC83Q8IWF9 413 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms