RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 PNOCQ13519 176 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 CAMK4Q16566 473 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 PTGISQ16647 500 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 FAM102BQ5T8I3 360 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 UNC13DQ70J99 1090 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 MAEAQ7L5Y9 396 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 UBE2Q1Q7Z7E8 422 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 CCDC65Q8IXS2 484 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 KIAA0319LQ8IZA0 1049 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 ZNF710Q8N1W2 664 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 TOX2Q96NM4 488 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 GSDMAQ96QA5 445 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 REEP2Q9BRK0 252 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 BLZF1Q9H2G9 400 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 PCDHA5Q9Y5H7 936 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 MYH11P35749 1972 aa13.65□□□□□ -0.22
LINC00339-201ENST00000404210 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 TLR3O15455 904 aaKnown RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 KLRC4O43908 158 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 FAM13AO94988 1023 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 CD4P01730 458 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 IDEP14735 1019 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 GAP43P17677 238 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 CASP1P29466 404 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 ASIC1P78348 528 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 RAD51AP2Q09MP3 1159 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 MAPK7Q13164 816 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 PSMD2Q13200 908 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 KCNB1Q14721 858 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 NT5DC1Q5TFE4 455 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 ANKRD33Q7Z3H0 272 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 RPAINQ86UA6 219 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 SERINC5Q86VE9 423 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 FAM126BQ8IXS8 530 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 DAW1Q8N136 415 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 LRRC71Q8N4P6 559 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 PSPC1Q8WXF1 523 aaKnown RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 SMARCE1Q969G3 411 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 TMEM143Q96AN5 459 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 PARVGQ9HBI0 331 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 POLD4Q9HCU8 107 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 PANK4Q9NVE7 773 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 SUCLA2Q9P2R7 463 aaPredicted RBP13.64□□□□□ -0.23
LINC00339-201ENST00000404210 SEL1LQ9UBV2 794 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 HTTP42858 3142 aa13.64□□□□□ -0.23
LINC00339-201ENST00000404210 SFI1A8K8P3 1242 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 RSPH10B2B2RC85 870 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 B4GALT4O60513 344 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 RSPH10BP0C881 870 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 MAPTP10636 758 aaKnown RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 PLS3P13797 630 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 CLCN3P51790 818 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 SOX10P56693 466 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 EHHADHQ08426 723 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 DRP2Q13474 957 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 PPP2R5AQ15172 486 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 KMT5BQ4FZB7 885 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 RUFY4Q6ZNE9 571 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 MYCT1Q8N699 235 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 PRPF31Q8WWY3 499 aaKnown RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 ZBTB10Q96DT7 871 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 IFT74Q96LB3 600 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 GPRC5CQ9NQ84 441 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 TRMT13Q9NUP7 481 aaKnown RBP13.63□□□□□ -0.23
LINC00339-201ENST00000404210 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
LINC00339-201ENST00000404210 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 GLRA2P23416 452 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 SMTNP53814 917 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-201ENST00000404210 TNS4Q8IZW8 715 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 ASAP3Q8TDY4 903 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 SPIRE2Q8WWL2 714 aa13.62□□□□□ -0.23
LINC00339-201ENST00000404210 GTPBP4Q9BZE4 634 aaKnown RBP13.62□□□□□ -0.23
LINC00339-201ENST00000404210 TRPV6Q9H1D0 765 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms