RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 PARVBQ9HBI1 364 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 KCNJ14Q9UNX9 436 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 CHMP2BQ9UQN3 213 aa7.93□□□□□ -1.14
SYNE2-205ENST00000394768 PFKFB1P16118 471 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 SERPINB4P48594 390 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 EHHADHQ08426 723 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ARMC6Q6NXE6 501 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 CAPN12Q6ZSI9 719 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 TSPAN17Q96FV3 270 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 AAASQ9NRG9 546 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 EVA1BQ9NVM1 165 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 A0A1W2PQ27 194 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 A0A1W2PQ64 194 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 A0A1W2PQD8 194 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 MMEP08473 750 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF445P59923 1031 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 DR1Q01658 176 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF699Q32M78 642 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NCOA5Q9HCD5 579 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 BNIP3LO60238 219 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PFKFB2O60825 505 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 RWDD2BP57060 319 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NBPF9Q3BBW0 867 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 LCA5Q86VQ0 697 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 DDX42Q86XP3 938 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 FOXP4Q8IVH2 680 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 SYMPKQ92797 1274 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ALKBH8Q96BT7 664 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 C19orf60Q96EN9 201 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PLEKHG1Q9ULL1 1385 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 RNF123Q5XPI4 1314 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 COPEO14579 308 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 CYP2C19P33261 490 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NBPF20Q3BBV1 942 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PREPLQ4J6C6 727 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 RARS2Q5T160 578 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 OR6B2Q6IFH4 312 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NBPF10Q6P3W6 841 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 GPR108Q9NPR9 543 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 MAN1C1Q9NR34 630 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PAPOLBQ9NRJ5 636 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 KDM5DQ9BY66 1539 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 CFAP99D6REC4 459 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 HIST1H2AGP0C0S8 130 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 HIST1H2ADP20671 130 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 GNL1P36915 607 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PRAMEP78395 509 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 EFTUD2Q15029 972 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PKN3Q6P5Z2 889 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 HIST1H2AHQ96KK5 128 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 HIST1H2AJQ99878 128 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 H2AFJQ9BTM1 129 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 SNX14Q9Y5W7 946 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 GOLGA8SH3BPF8 625 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 KIAA0391O15091 583 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 IGHDP01880 384 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 MYL3P08590 195 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ZAP70P43403 619 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 AMPD2Q01433 879 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NLRP4Q96MN2 994 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ZWILCHQ9H900 591 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NXF1Q9UBU9 619 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 RWDD2AQ9UIY3 292 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 SATB2Q9UPW6 733 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PPP2R2CQ9Y2T4 447 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ZSCAN9O15535 394 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 NSUN2Q08J23 767 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 ANO4Q32M45 955 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 VPS37AQ8NEZ2 397 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 TSEN34Q9BSV6 310 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 WARS2Q9UGM6 360 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 H7C0S8 307 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 UBXN2AP68543 259 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 BTBD8Q5XKL5 378 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 HEATR6Q6AI08 1181 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 TMEM179Q6ZVK1 233 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 PRUNE1Q86TP1 453 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 OR6B3Q8NGW1 331 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 XPO6Q96QU8 1125 aaKnown RBP7.92□□□□□ -1.14
SYNE2-205ENST00000394768 DPH5Q9H2P9 285 aa7.92□□□□□ -1.14
SYNE2-205ENST00000394768 M0R3G1 203 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 TK2O00142 265 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 PLS3P13797 630 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 TCP11X2Q5H9J9 407 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF658Q5TYW1 1059 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-205ENST00000394768 ZNF544Q6NX49 715 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 TMEM35BQ8NCS4 154 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 XPO4Q9C0E2 1151 aaKnown RBP7.91□□□□□ -1.14
SYNE2-205ENST00000394768 GOLPH3LQ9H4A5 285 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 THAP9Q9H5L6 903 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 SLC39A2Q9NP94 309 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 KRT14P02533 472 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 KRT76Q01546 638 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 TBC1D1Q86TI0 1168 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-205ENST00000394768 P2RX5Q93086 422 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 FAF2Q96CS3 445 aa7.91□□□□□ -1.14
SYNE2-205ENST00000394768 OXCT2Q9BYC2 517 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-205ENST00000394768 MRPS26Q9BYN8 205 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms