RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ELAC1Q9H777 363 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 KCNMB3Q9NPA1 279 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 TYW1Q9NV66 732 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 TMEM161AQ9NX61 479 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 DDX25Q9UHL0 483 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 NCK2O43639 380 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 CSDE1O75534 798 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 FDPSP14324 419 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 FGFR4P22455 802 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 TMOD1P28289 359 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 AK2P54819 239 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 TBC1D8BQ0IIM8 1120 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 ADAM15Q13444 863 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 LETM2Q2VYF4 491 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 PUS10Q3MIT2 529 aaKnown RBP20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 LRRC55Q6ZSA7 311 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 SEPT9Q9UHD8 586 aaPredicted RBP20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 VAV3Q9UKW4 847 aa20.54■□□□□ 0.88
PDLIM7-205ENST00000393551 PI4K2BG5E9Z4 385 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 LARGE1O95461 756 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 DARSP14868 501 aaKnown RBP20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 ANAPC15P60006 121 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 CLUL1Q15846 466 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 MTERF2Q49AM1 385 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 XKR3Q5GH77 459 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 ANO5Q75V66 913 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 CASD1Q96PB1 797 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 LRFN3Q9BTN0 628 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 ATP6V0A4Q9HBG4 840 aa20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 WRAP73Q9P2S5 460 aaPredicted RBP20.53■□□□□ 0.88
PDLIM7-205ENST00000393551 FAM205CA6NFA0 338 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 CDKL5O76039 1030 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 ZP2Q05996 745 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 PPP4R3AQ6IN85 833 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 ZNF710Q8N1W2 664 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 NECAB1Q8N987 351 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 COLGALT1Q8NBJ5 622 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 HAS1Q92839 578 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 CLEC1BQ9P126 229 aa20.52■□□□□ 0.88
PDLIM7-205ENST00000393551 FGF18O76093 207 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 ATF7P17544 494 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 PPP2R5CQ13362 524 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 ME3Q16798 604 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 CLLU1OSQ5K130 101 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 PIK3AP1Q6ZUJ8 805 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 NEK8Q86SG6 692 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 ECHDC2Q86YB7 292 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 ZNF579Q8NAF0 562 aaKnown RBP20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 MSLNLQ96KJ4 702 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 ORC3Q9UBD5 711 aaPredicted RBP20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 PCDHB12Q9Y5F1 795 aa20.51■□□□□ 0.87
PDLIM7-205ENST00000393551 CCDC194A0A1B0GVG4 234 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 C19orf67A6NJJ6 358 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 DDX11L8A8MPP1 907 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 MBTPS2O43462 519 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 MAFO75444 373 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 GLP2RO95838 553 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 ERVFC1P60507 584 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 SMAD2Q15796 467 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 SPOUT1Q5T280 376 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 PLA2G4FQ68DD2 849 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 RBM23Q86U06 439 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 ZNF598Q86UK7 904 aaKnown RBP20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 NLRP7Q8WX94 980 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 TNFRSF25Q93038 417 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 TMEM117Q9H0C3 514 aa20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
PDLIM7-205ENST00000393551 A0A087WZ62 844 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 A0A0U1RQF3 1178 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 FAM86C2PA6NEL3 165 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 ZSCAN20P17040 1043 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 NRIP1P48552 1158 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 PSMC5P62195 406 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 UBE3AQ05086 875 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 NR5A1Q13285 461 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 KSR1Q8IVT5 923 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 EFHBQ8N7U6 833 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 FAM20AQ96MK3 541 aa20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 FDXACB1Q9BRP7 624 aaPredicted RBP20.49■□□□□ 0.87
PDLIM7-205ENST00000393551 FSCN2O14926 492 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 CCNT1O60563 726 aaKnown RBP20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 GPR37L1O60883 481 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 SEC24BO95487 1268 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 PBX3P40426 434 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 NPEPPSP55786 919 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 SPIRE1Q08AE8 756 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 ADHFE1Q8IWW8 467 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 VN1R2Q8NFZ6 395 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 GTF3C6Q969F1 213 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 SCLT1Q96NL6 688 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 CYP26B1Q9NR63 512 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 TLR9Q9NR96 1032 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 AAASQ9NRG9 546 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 SUCLA2Q9P2R7 463 aaPredicted RBP20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 PRKAG3Q9UGI9 489 aa20.48■□□□□ 0.87
PDLIM7-205ENST00000393551 PER2O15055 1255 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms