RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 GTSE1Q9NYZ3 720 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 ATP1A1P05023 1023 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 SGSM3Q96HU1 749 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 RBM17Q96I25 401 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 OLA1Q9NTK5 396 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 CCDC88CQ9P219 2028 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 PMLP29590 882 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 KDSRQ06136 332 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 BRDTQ58F21 947 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 ACCSQ96QU6 501 aa13.23□□□□□ -0.29
SRGAP3-202ENST00000383836 VCAM1P19320 739 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 NT5C2P49902 561 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 PDE4DIPQ5VU43 2346 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 PIK3R2O00459 728 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 FOXP2O15409 715 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ZBED4O75132 1171 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ZRANB2O95218 330 aaKnown RBP eCLIP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 PROM2Q8N271 834 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 EME1Q96AY2 570 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ASPSCR1Q9BZE9 553 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 CAB39Q9Y376 341 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 SESN1Q9Y6P5 492 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 RSPH10B2B2RC85 870 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 USP17L21D6R901 530 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 RSPH10BP0C881 870 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 POLGP54098 1239 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ARHGEF16Q5VV41 709 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ANGPTL8Q6UXH0 198 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ANKRD36BP1Q96IX9 119 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 UBTFL6P0CB48 400 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 PAPOLAP51003 745 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 INPP5AQ14642 412 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ARL6IP4Q66PJ3 421 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 GGT7Q9UJ14 662 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 HOXC9P31274 260 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 SNRNP27Q8WVK2 155 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 CCT7Q99832 543 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 NPHS2Q9NP85 383 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 IRAK1P51617 712 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 VPS39Q96JC1 886 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 SH3GL1Q99961 368 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 POLE3Q9NRF9 147 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 SMG5Q9UPR3 1016 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 TMEM247A6NEH6 219 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 PJA2O43164 708 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 UFL1O94874 794 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 ADAMTS2O95450 1211 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 RAB14P61106 215 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 COQ7Q99807 217 aa13.22□□□□□ -0.29
SRGAP3-202ENST00000383836 PRR23D1E9PI22 279 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 GOLGA8SH3BPF8 625 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 PRR23D2P0DMB1 279 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 IL2RBP14784 551 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 ALDH18A1P54886 795 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CCDC137Q6PK04 289 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 SH2D3CQ8N5H7 860 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CHMP2BQ9UQN3 213 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 TSPOAP1O95153 1857 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CLIC2O15247 247 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 PAPOLBQ9NRJ5 636 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 TBC1D4O60343 1298 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 BBS5Q8N3I7 341 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 SDR42E1Q8WUS8 393 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 LZICQ8WZA0 190 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 GCOM2Q9BZD3 368 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 AURKCQ9UQB9 309 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 GOLGA8MH3BSY2 632 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CYP21A2P08686 494 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 TSTA3Q13630 321 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 FBXO31Q5XUX0 539 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CARD9Q9H257 536 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CEP78Q5JTW2 689 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CCDC103Q8IW40 242 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CYGBQ8WWM9 190 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 ANAPC7Q9UJX3 599 aa13.21□□□□□ -0.29
SRGAP3-202ENST00000383836 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms