RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 NEDD1Q8NHV4 660 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 PRMT6Q96LA8 375 aaPredicted RBP12.05□□□□□ -0.48
CCDC40-203ENST00000374877 SELENOSQ9BQE4 189 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 PCDHAC2Q9Y5I4 1007 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 TLDC2A0PJX2 215 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 BTNL10A8MVZ5 291 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 POTECB2RU33 542 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 F8VZ95 297 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 H2AFZP0C0S5 128 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 LMNB1P20700 586 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 BYSLQ13895 437 aaKnown RBP12.05□□□□□ -0.48
CCDC40-203ENST00000374877 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 H2AFVQ71UI9 128 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 ARMCX3Q9UH62 379 aaPredicted RBP12.05□□□□□ -0.48
CCDC40-203ENST00000374877 SERPINB13Q9UIV8 391 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
CCDC40-203ENST00000374877 FGGP02679 453 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 EZRP15311 586 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 ARMC9Q7Z3E5 817 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 VPS36Q86VN1 386 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 LMBR1Q8WVP7 490 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 HAS1Q92839 578 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 FMO2Q99518 471 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 KCTD10Q9H3F6 313 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 SLITRK6Q9H5Y7 841 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 BZW2Q9Y6E2 419 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 NOVP48745 357 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 RPAINQ86UA6 219 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 FAM228AQ86W67 206 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 CCDC50Q8IVM0 306 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 CHMP6Q96FZ7 201 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 C5orf60A6NFR6 353 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 CAND2O75155 1236 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 AFPP02771 609 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 COPB2P35606 906 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
CCDC40-203ENST00000374877 RIOX1Q9H6W3 641 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 VEZTQ9HBM0 779 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 FAM114A2Q9NRY5 505 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 DONSONQ9NYP3 566 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 PI4KBQ9UBF8 816 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 CEP83Q9Y592 693 aa12.04□□□□□ -0.48
CCDC40-203ENST00000374877 PAEPP09466 180 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 DRD4P21917 467 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CASP5P51878 434 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 PPP1R7Q15435 360 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 GJB7Q6PEY0 223 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 DHX37Q8IY37 1157 aaKnown RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 XPO6Q96QU8 1125 aaKnown RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 MYH7BA7E2Y1 1941 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 XRCC5P13010 732 aaKnown RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 PON1P27169 355 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 HIBCHQ6NVY1 386 aaPredicted RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CLEC10AQ8IUN9 316 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 TBC1D31Q96DN5 1066 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 BAIAP2L1Q9UHR4 511 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 AMFRQ9UKV5 643 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 KDM3AQ9Y4C1 1321 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CYP11B2P19099 503 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 SCP2P22307 547 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 WLSQ5T9L3 541 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 FAM83AQ86UY5 434 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 NT5DC3Q86UY8 548 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 SYCE1Q8N0S2 351 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CCT6BQ92526 530 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 CNOT10Q9H9A5 744 aaKnown RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
CCDC40-203ENST00000374877 SUCLA2Q9P2R7 463 aaPredicted RBP12.03□□□□□ -0.48
CCDC40-203ENST00000374877 SPDYE3A6NKU9 549 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 GFPT2O94808 682 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 SHBGP04278 402 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 MMEP08473 750 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 ABCB4P21439 1286 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 HOOK3Q86VS8 718 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 FAM151AQ8WW52 585 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 OSGEPQ9NPF4 335 aa12.02□□□□□ -0.48
CCDC40-203ENST00000374877 AJAP1Q9UKB5 411 aaPredicted RBP12.02□□□□□ -0.48
CCDC40-203ENST00000374877 FRMD3A2A2Y4 597 aa12.02□□□□□ -0.49
CCDC40-203ENST00000374877 RPSAP08865 295 aaKnown RBP12.02□□□□□ -0.49
CCDC40-203ENST00000374877 CHN1P15882 459 aa12.02□□□□□ -0.49
CCDC40-203ENST00000374877 SMARCA1P28370 1054 aa12.02□□□□□ -0.49
CCDC40-203ENST00000374877 SHMT1P34896 483 aa12.02□□□□□ -0.49
CCDC40-203ENST00000374877 STAT3P40763 770 aa12.02□□□□□ -0.49
CCDC40-203ENST00000374877 EDRF1Q3B7T1 1238 aa12.02□□□□□ -0.49
CCDC40-203ENST00000374877 ZFPM1Q8IX07 1006 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms