RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 NONOQ15233 471 aaKnown RBP eCLIP10.96□□□□□ -0.65
CD28-202ENST00000374481 FAM26FQ5R3K3 315 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 ERMARDQ5T6L9 678 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 LRRC8BQ6P9F7 803 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 CNKSR1Q969H4 720 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 NSL1Q96IY1 281 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 RNF26Q9BY78 433 aaPredicted RBP10.96□□□□□ -0.65
CD28-202ENST00000374481 DKK3Q9UBP4 350 aa10.96□□□□□ -0.65
CD28-202ENST00000374481 ACEP12821 1306 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 SYNGAP1Q96PV0 1343 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 FAM47DPA6NHR8 397 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 LCA5LO95447 670 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 PLCG2P16885 1265 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ADRA2BP18089 450 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 MARK2Q7KZI7 788 aaKnown RBP10.96□□□□□ -0.66
CD28-202ENST00000374481 BLIDQ8IZY5 108 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ZFAND2BQ8WV99 257 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 EFHD1Q9BUP0 239 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ROPN1BQ9BZX4 212 aaPredicted RBP10.96□□□□□ -0.66
CD28-202ENST00000374481 ROPN1Q9HAT0 212 aaPredicted RBP10.96□□□□□ -0.66
CD28-202ENST00000374481 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ZNF229Q9UJW7 825 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ARHGEF10O15013 1369 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 SSU72P8A0A1W2PR75 194 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 MGEA5O60502 916 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ENO1P06733 434 aaKnown RBP10.96□□□□□ -0.66
CD28-202ENST00000374481 SNRPA1P09661 255 aaKnown RBP10.96□□□□□ -0.66
CD28-202ENST00000374481 EXOSC10Q01780 885 aaKnown RBP10.96□□□□□ -0.66
CD28-202ENST00000374481 GRIN1Q05586 938 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 LRRC41Q15345 812 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 SIX5Q8N196 739 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 JDP2Q8WYK2 163 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 COPRSQ9NQ92 184 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ANKFY1Q9P2R3 1169 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 AGTPBP1Q9UPW5 1226 aa10.96□□□□□ -0.66
CD28-202ENST00000374481 ZBBXA8MT70 800 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 F8VZ95 297 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 ARL1P40616 181 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 TECP42680 631 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 DNAL1Q4LDG9 190 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 B3GNT6Q6ZMB0 384 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 DDI1Q8WTU0 396 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 CFLARO15519 480 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 ELOA2Q8IYF1 753 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 CCDC89Q8N998 374 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 ERP44Q9BS26 406 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 GDF3Q9NR23 364 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 DISC1Q9NRI5 854 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 EURLQ9NYK6 297 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 WDR37Q9Y2I8 494 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 MED23Q9ULK4 1368 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 XPO1O14980 1071 aaKnown RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 PLEKP08567 350 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 MTA1Q13330 715 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 PPP2R5CQ13362 524 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.66
CD28-202ENST00000374481 RIBC1Q8N443 379 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 ZNF594Q96JF6 807 aaPredicted RBP10.95□□□□□ -0.66
CD28-202ENST00000374481 CCDC138Q96M89 665 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 PLEKHG4BQ96PX9 1271 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 SLC5A4Q9NY91 659 aa10.95□□□□□ -0.66
CD28-202ENST00000374481 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 FLT4P35916 1363 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 NOP56O00567 594 aaKnown RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 CCDC166P0CW27 439 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 SCG2P13521 617 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CPA2P48052 419 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 TMPRSS15P98073 1019 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 DPYDQ12882 1025 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 PI16Q6UXB8 463 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 TMEM110Q86TL2 294 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 FAM186BQ8IYM0 893 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 MREGQ8N565 214 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 OSBP2Q969R2 916 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CENPTQ96BT3 561 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 WARS2Q9UGM6 360 aaKnown RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 CCPG1Q9ULG6 757 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ZNF532Q9HCE3 1301 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 A8MUI8 341 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ENTPD5O75356 428 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 GFPT2O94808 682 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 UNC5CO95185 931 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 ABL1P00519 1130 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 KRT8P05787 483 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 NCF2P19878 526 aaPredicted RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 KLRC1P26715 233 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 POLGP54098 1239 aaPredicted RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 USPL1Q5W0Q7 1092 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CLEC4GQ6UXB4 293 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 TRMT10CQ7L0Y3 403 aaKnown RBP10.94□□□□□ -0.66
CD28-202ENST00000374481 KRT25Q7Z3Z0 450 aa10.94□□□□□ -0.66
CD28-202ENST00000374481 CRLF3Q8IUI8 442 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms