RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GUCD1Q96NT3 240 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 NUCKS1Q9H1E3 243 aaKnown RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 LZTFL1Q9NQ48 299 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 SIK3Q9Y2K2 1263 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 CTDP1Q9Y5B0 961 aaPredicted RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 MYH11P35749 1972 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 EIF3CLB5ME19 914 aaKnown RBP15.48■□□□□ 0.07
LDB3-204ENST00000372066 FANCGO15287 622 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 TADA3O75528 432 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 ICAM1P05362 532 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 ZNF865P0CJ78 1059 aaPredicted RBP15.48■□□□□ 0.07
LDB3-204ENST00000372066 FDX1P10109 184 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 AKR1A1P14550 325 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 ELF2Q15723 593 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 SNRNP48Q6IEG0 339 aaKnown RBP15.48■□□□□ 0.07
LDB3-204ENST00000372066 NIPA1Q7RTP0 329 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 MCF2L2Q86YR7 1114 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 ACRBPQ8NEB7 543 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 EIF3CQ99613 913 aaKnown RBP15.48■□□□□ 0.07
LDB3-204ENST00000372066 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
LDB3-204ENST00000372066 TEX13BQ9BXU2 312 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 KCND2Q9NZV8 630 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 A0A0C4DFX4 3053 aa15.48■□□□□ 0.07
LDB3-204ENST00000372066 CTAGE9A4FU28 777 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 ZBED4O75132 1171 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 PSMD10O75832 226 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 HSD17B4P51659 736 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 GIT2Q14161 759 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 BMT2Q1RMZ1 405 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 CCDC40Q4G0X9 1142 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 ARSHQ5FYA8 562 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 LRCH2Q5VUJ6 765 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 WDR59Q6PJI9 974 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 CPXCR1Q8N123 301 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 TXLNBQ8N3L3 684 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 CEP112Q8N8E3 955 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 PRPF38AQ8NAV1 312 aaKnown RBP15.47■□□□□ 0.07
LDB3-204ENST00000372066 KCTD10Q9H3F6 313 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 ARGLU1Q9NWB6 273 aaPredicted RBP15.47■□□□□ 0.07
LDB3-204ENST00000372066 PLAGL2Q9UPG8 496 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 RIPK3Q9Y572 518 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 DNAH12Q6ZR08 3092 aa15.47■□□□□ 0.07
LDB3-204ENST00000372066 RLFQ13129 1914 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 UBE4BO95155 1302 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 ZNF236Q9UL36 1845 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 TBCAO75347 108 aaKnown RBP15.46■□□□□ 0.07
LDB3-204ENST00000372066 CLTBP09497 229 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 ARHGAP25P42331 645 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 ZNF569Q5MCW4 686 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 SCFD1Q8WVM8 642 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 LENG1Q96BZ8 264 aaPredicted RBP15.46■□□□□ 0.07
LDB3-204ENST00000372066 CHP1Q99653 195 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 NAPGQ99747 312 aaPredicted RBP15.46■□□□□ 0.07
LDB3-204ENST00000372066 CARD6Q9BX69 1037 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 TSGA10Q9BZW7 698 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 OLFML3Q9NRN5 406 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 TRAF3IP3Q9Y228 551 aa15.46■□□□□ 0.07
LDB3-204ENST00000372066 A0A1W2PQ45 241 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 A0A1W2PQY0 241 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 PDXKO00764 312 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 CETN3O15182 167 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 KRT86O43790 486 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 CALUO43852 315 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 PQBP1O60828 265 aaKnown RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 GAS7O60861 476 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 SNAI1O95863 264 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 ITGB8P26012 769 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 EPM2AIP1Q7L775 607 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 TRIM59Q8IWR1 403 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 MSL3Q8N5Y2 521 aaKnown RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 NEK11Q8NG66 645 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 RIT2Q99578 217 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 HSD17B14Q9BPX1 270 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 REEP2Q9BRK0 252 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 TEKT3Q9BXF9 490 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 RAVER2Q9HCJ3 691 aaKnown RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 TMEM39AQ9NV64 488 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 SEL1LQ9UBV2 794 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 CDC23Q9UJX2 597 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 MEIS1O00470 390 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
LDB3-204ENST00000372066 RAG1P15918 1043 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 H2AFXP16104 143 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 NAA30Q147X3 362 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 KNOP1Q1ED39 458 aaKnown RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 GLIS3Q8NEA6 775 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 SYN2Q92777 582 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 CDX2Q99626 313 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 TSEN34Q9BSV6 310 aaKnown RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 NHEJ1Q9H9Q4 299 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 AGPAT5Q9NUQ2 364 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 ZHX1Q9UKY1 873 aaPredicted RBP15.45■□□□□ 0.06
LDB3-204ENST00000372066 CCPG1Q9ULG6 757 aa15.45■□□□□ 0.06
LDB3-204ENST00000372066 A0A0G2JMZ2 1700 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 FRMPD3Q5JV73 1810 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 FRMPD4Q14CM0 1322 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 SYNGAP1Q96PV0 1343 aa15.44■□□□□ 0.06
LDB3-204ENST00000372066 DNAJC25-GNG10A0A024R161 153 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms