RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 HAUS6Q7Z4H7 955 aa19.25■□□□□ 0.67
SSBP3-203ENST00000371319 SLC17A8Q8NDX2 589 aa19.25■□□□□ 0.67
SSBP3-203ENST00000371319 MCPH1Q8NEM0 835 aa19.25■□□□□ 0.67
SSBP3-203ENST00000371319 BORCS6Q96GS4 357 aa19.25■□□□□ 0.67
SSBP3-203ENST00000371319 PCMTD1Q96MG8 357 aaPredicted RBP19.25■□□□□ 0.67
SSBP3-203ENST00000371319 TMEM206Q9H813 350 aa19.25■□□□□ 0.67
SSBP3-203ENST00000371319 PDGFCQ9NRA1 345 aa19.25■□□□□ 0.67
SSBP3-203ENST00000371319 ARMCX3Q9UH62 379 aaPredicted RBP19.25■□□□□ 0.67
SSBP3-203ENST00000371319 LUC7L2Q9Y383 392 aaKnown RBP19.25■□□□□ 0.67
SSBP3-203ENST00000371319 LGR5O75473 907 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 TCF7P36402 384 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-203ENST00000371319 NPTX2P47972 431 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 RTP1P59025 263 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 GRB14Q14449 540 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 MTF1Q14872 753 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 TMEM63BQ5T3F8 832 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 TOGARAM2Q6ZUX3 1019 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 HS2ST1Q7LGA3 356 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 ZNF467Q7Z7K2 595 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-203ENST00000371319 SLC9A9Q8IVB4 645 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 OR8K1Q8NGG5 319 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 GOLGA5Q8TBA6 731 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 SPIRE2Q8WWL2 714 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 COPS5Q92905 334 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 IQCDQ96DY2 449 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 METTL14Q9HCE5 456 aaKnown RBP19.24■□□□□ 0.67
SSBP3-203ENST00000371319 AGPAT5Q9NUQ2 364 aa19.24■□□□□ 0.67
SSBP3-203ENST00000371319 DIS3Q9Y2L1 958 aaKnown RBP19.24■□□□□ 0.67
SSBP3-203ENST00000371319 IGF2BP3O00425 579 aaKnown RBP eCLIP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 EPHB6O15197 1021 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TRIM21P19474 475 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 STAT5BP51692 787 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 ZBED6P86452 979 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 PPP2R3AQ06190 1150 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 KCNH2Q12809 1159 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 MYBPC2Q14324 1141 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 EMC2Q15006 297 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 REXO1L1PQ8IX06 675 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 SYCP3Q8IZU3 236 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TMEM161BQ8NDZ6 487 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TMEM174Q8WUU8 243 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 HVCN1Q96D96 273 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 C16orf45Q96MC5 204 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 NTPCRQ9BSD7 190 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 MKNK1Q9BUB5 465 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 C17orf75Q9HAS0 396 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 PASKQ96RG2 1323 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 MANSC4A6NHS7 340 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TXNP10599 105 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 PSMC2P35998 433 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 DMP1Q13316 513 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TTLL4Q14679 1199 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TARBP2Q15633 366 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 HSDL1Q3SXM5 330 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 DNTTIP2Q5QJE6 756 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 RGMBQ6NW40 437 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TAPT1Q6NXT6 567 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 PLEKHH3Q7Z736 793 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 SAPCD2Q86UD0 394 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 TMTC1Q8IUR5 882 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 C12orf56Q8IXR9 622 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 FAM186BQ8IYM0 893 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 KATNBL1Q9H079 304 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 POLR3FQ9H1D9 316 aaPredicted RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 DHX33Q9H6R0 707 aaKnown RBP19.23■□□□□ 0.67
SSBP3-203ENST00000371319 VTA1Q9NP79 307 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 PPP2R2CQ9Y2T4 447 aa19.23■□□□□ 0.67
SSBP3-203ENST00000371319 SIP14410 1827 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 RBM47A0AV96 593 aaKnown RBP19.22■□□□□ 0.67
SSBP3-203ENST00000371319 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 CCDC169A6NNP5 214 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 CCP110O43303 1012 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 MAPK4P31152 587 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 CYP2J2P51589 502 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 MAMDC4Q6UXC1 1216 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 CYP26C1Q6V0L0 522 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 DHX37Q8IY37 1157 aaKnown RBP19.22■□□□□ 0.67
SSBP3-203ENST00000371319 SCFD2Q8WU76 684 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 SPATA33Q96N06 139 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 KIFC3Q9BVG8 833 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 MMRN2Q9H8L6 949 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 ZCCHC17Q9NP64 241 aaKnown RBP19.22■□□□□ 0.67
SSBP3-203ENST00000371319 KMT5AQ9NQR1 393 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 NRBP2Q9NSY0 501 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 CGNQ9P2M7 1197 aaKnown RBP19.22■□□□□ 0.67
SSBP3-203ENST00000371319 CPA4Q9UI42 421 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 TBX20Q9UMR3 447 aa19.22■□□□□ 0.67
SSBP3-203ENST00000371319 TISP43B9A030 160 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 AFPP02771 609 aaKnown RBP19.21■□□□□ 0.67
SSBP3-203ENST00000371319 SLC10A3P09131 477 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 TNNT1P13805 278 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 SMTNP53814 917 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 POLGP54098 1239 aaPredicted RBP19.21■□□□□ 0.67
SSBP3-203ENST00000371319 MEA1Q16626 185 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 WDR59Q6PJI9 974 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 SLC35C1Q96A29 364 aa19.21■□□□□ 0.67
SSBP3-203ENST00000371319 LSM14BQ9BX40 385 aaKnown RBP19.21■□□□□ 0.67
SSBP3-203ENST00000371319 FAM207AQ9NSI2 230 aaPredicted RBP19.21■□□□□ 0.67
SSBP3-203ENST00000371319 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms