RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 TK2O00142 265 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 C22orf31O95567 290 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 PSAPP07602 524 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 FGFR1P11362 822 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 PRR16Q569H4 304 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 FAM102BQ5T8I3 360 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 MCTP2Q6DN12 878 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 ZNF746Q6NUN9 644 aaPredicted RBP11.72□□□□□ -0.53
CLRN3-201ENST00000368671 SLC24A5Q71RS6 500 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 FAM228AQ86W67 206 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 REXO1Q8N1G1 1221 aaKnown RBP11.72□□□□□ -0.53
CLRN3-201ENST00000368671 EFHBQ8N7U6 833 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 RASGRP4Q8TDF6 673 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
CLRN3-201ENST00000368671 CRYGNQ8WXF5 182 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 PHKBQ93100 1093 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 MSLNLQ96KJ4 702 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 TBC1D22BQ9NU19 505 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 GABBR1Q9UBS5 961 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 MUTYHQ9UIF7 546 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 BARX2Q9UMQ3 279 aaPredicted RBP11.72□□□□□ -0.53
CLRN3-201ENST00000368671 PCDHB12Q9Y5F1 795 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 MAFBQ9Y5Q3 323 aaPredicted RBP11.72□□□□□ -0.53
CLRN3-201ENST00000368671 WDR81Q562E7 1941 aa11.72□□□□□ -0.53
CLRN3-201ENST00000368671 C9IYK1 514 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 PER2O15055 1255 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
CLRN3-201ENST00000368671 GNA11P29992 359 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 CLCN3P51790 818 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 CRYBB1P53674 252 aaPredicted RBP11.71□□□□□ -0.53
CLRN3-201ENST00000368671 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
CLRN3-201ENST00000368671 PKN1Q16512 942 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 BLOC1S2Q6QNY1 142 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 RNF135Q8IUD6 432 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 SMAP1Q8IYB5 467 aaPredicted RBP11.71□□□□□ -0.53
CLRN3-201ENST00000368671 THNSL1Q8IYQ7 743 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 ZNF668Q96K58 619 aaPredicted RBP11.71□□□□□ -0.53
CLRN3-201ENST00000368671 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 TLE6Q9H808 572 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 ATP6V0A4Q9HBG4 840 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.53
CLRN3-201ENST00000368671 CLEC1BQ9P126 229 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 CEP131Q9UPN4 1083 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 AKT3Q9Y243 479 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 PCDHA10Q9Y5I2 948 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 SNX14Q9Y5W7 946 aa11.71□□□□□ -0.53
CLRN3-201ENST00000368671 NID2Q14112 1375 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 GPR32O75388 356 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 FGF18O76093 207 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 GLP2RO95838 553 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 ERVFC1P60507 584 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 UBE3AQ05086 875 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 EFCAB12Q6NXP0 572 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 LRRC71Q8N4P6 559 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 SLC26A6Q9BXS9 759 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 VPS54Q9P1Q0 977 aa11.7□□□□□ -0.54
CLRN3-201ENST00000368671 BRWD1Q9NSI6 2320 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 MAGEB2O15479 319 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 CHMP2AO43633 222 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 EYA4O95677 639 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 OATP04181 439 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 LAG3P18627 525 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 RPS6KB1P23443 525 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 CIITAP33076 1130 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 HSPA4P34932 840 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 MLLT3P42568 568 aaPredicted RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 NLRP11P59045 1033 aaKnown RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 RBM10P98175 930 aaKnown RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 COASYQ13057 564 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 DSC3Q14574 896 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 HERC4Q5GLZ8 1057 aaPredicted RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 PLPP4Q5VZY2 271 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 ADGRD1Q6QNK2 874 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 FAM43BQ6ZT52 329 aaPredicted RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 ALYREFQ86V81 257 aaKnown RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 SMRP1Q8NCR6 262 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 BICD2Q8TD16 824 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 KCNB2Q92953 911 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 FAM167AQ96KS9 214 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 SCLT1Q96NL6 688 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 MAP7D2Q96T17 732 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 CWH43Q9H720 699 aa11.69□□□□□ -0.54
CLRN3-201ENST00000368671 ELAC1Q9H777 363 aaKnown RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 USP15Q9Y4E8 981 aaPredicted RBP11.69□□□□□ -0.54
CLRN3-201ENST00000368671 MSH4O15457 936 aa11.68□□□□□ -0.54
CLRN3-201ENST00000368671 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
CLRN3-201ENST00000368671 TMOD1P28289 359 aa11.68□□□□□ -0.54
CLRN3-201ENST00000368671 NLRP5P59047 1200 aa11.68□□□□□ -0.54
CLRN3-201ENST00000368671 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
CLRN3-201ENST00000368671 FAM189BP81408 668 aa11.68□□□□□ -0.54
CLRN3-201ENST00000368671 PRKCEQ02156 737 aa11.68□□□□□ -0.54
CLRN3-201ENST00000368671 UGCGQ16739 394 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms