RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 C9orf50Q5SZB4 431 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 INTS3Q68E01 1043 aaKnown RBP0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 IQCEQ6IPM2 695 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 MFSD5Q6N075 450 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 CYP4F22Q6NT55 531 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 RFX6Q8HWS3 928 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 CPEB3Q8NE35 698 aaKnown RBP0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 CASKIN2Q8WXE0 1202 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 DNASE2BQ8WZ79 361 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 RNF34Q969K3 372 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 CHAMP1Q96JM3 812 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 SPRTNQ9H040 489 aaPredicted RBP0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 EPB41L1Q9H4G0 881 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 NRIP3Q9NQ35 241 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 TRPM5Q9NZQ8 1165 aa0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 CGGBP1Q9UFW8 167 aaPredicted RBP0.78□□□□□ -2.28
RNU6-340P-201ENST00000364005 A0A0G2JNJ9 132 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 GAGE12BA1L429 117 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 GAGE12HA6NDE8 117 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 IFITM10A6NMD0 228 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 GOLGA8BA8MQT2 603 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ARNTLO00327 626 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 KRIT1O00522 736 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 TOP3BO95985 862 aaKnown RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ALPLP05186 524 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ITGAMP11215 1152 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 HOXC13P31276 330 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 APOBEC3AP31941 199 aaPredicted RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 GBP2P32456 591 aaPredicted RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 STAT5BP51692 787 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ST5P78524 1137 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ADAM15Q13444 863 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 LLGL1Q15334 1064 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 DCAF17Q5H9S7 520 aaPredicted RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 KRTAP5-7Q6L8G8 165 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 GK5Q6ZS86 529 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 CXXC5Q7LFL8 322 aaKnown RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ADAT2Q7Z6V5 191 aaKnown RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 CCDC103Q8IW40 242 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ARHGEF39Q8N4T4 335 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 PIP4K2CQ8TBX8 421 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ST8SIA2Q92186 375 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 FUBP1Q96AE4 644 aaKnown RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 LYZL4Q96KX0 146 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ZNF512Q96ME7 567 aaPredicted RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 FRMD6Q96NE9 622 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 TMEM74Q96NL1 305 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLC6A15Q9H2J7 730 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLC6A20Q9NP91 592 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 CLDND1Q9NY35 253 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 Q9UFV3 132 aa0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 CTDP1Q9Y5B0 961 aaPredicted RBP0.77□□□□□ -2.29
RNU6-340P-201ENST00000364005 ROBO2Q9HCK4 1378 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 AOX1Q06278 1338 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 CARNS1A5YM72 827 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 MINDY4BA8MYZ0 360 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 ACOT7O00154 380 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 TNFRSF13BO14836 293 aaPredicted RBP0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 GRID2O43424 1007 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 BRINP1O60477 761 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 PPM1BO75688 479 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 SPDEFO95238 335 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 GNAT2P19087 354 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 GARTP22102 1010 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 CD83Q01151 205 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 ATP2B2Q01814 1243 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 DBPQ10586 325 aaPredicted RBP0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 GRM1Q13255 1194 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 LSAMPQ13449 338 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 LEXMQ3ZCV2 418 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 LCE3EQ5T5B0 92 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 UBAP2Q5T6F2 1119 aaKnown RBP0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 IQSEC1Q6DN90 963 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 GDF7Q7Z4P5 450 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 KRT73Q86Y46 540 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 RELL1Q8IUW5 271 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 ANKRD53Q8N9V6 530 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 DBF4BQ8NFT6 615 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 TAF15Q92804 592 aaKnown RBP eCLIP0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 DIO2Q92813 273 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 ARMC5Q96C12 935 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 PDLIM2Q96JY6 352 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 FGD4Q96M96 766 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 UROC1Q96N76 676 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 ADAM2Q99965 735 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 LRRC3Q9BY71 257 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 HAPLN2Q9GZV7 340 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 HIPK2Q9H2X6 1198 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLCO5A1Q9H2Y9 848 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 IL23AQ9NPF7 189 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 TMEM260Q9NX78 707 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 RNF181Q9P0P0 153 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 TELO2Q9Y4R8 837 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 PCDHA2Q9Y5H9 948 aa0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 TP53BP1Q12888 1972 aaPredicted RBP0.76□□□□□ -2.29
RNU6-340P-201ENST00000364005 GPD1P21695 349 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 DDX6P26196 483 aaKnown RBP eCLIP0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 PLCD1P51178 756 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 BPIFB4P59827 614 aa0.75□□□□□ -2.29
RNU6-340P-201ENST00000364005 ADAM8P78325 824 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms