RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 DLGAP2Q9P1A6 1054 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 LZTS1Q9Y250 596 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 PLA2G4AP47712 749 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 MFSD14BQ5SR56 506 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 L2HGDHQ9H9P8 463 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 DONSONQ9NYP3 566 aa13.56□□□□□ -0.24
SYNCRIP-201ENST00000355238 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 E7ENQ6 273 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 TLR3O15455 904 aaKnown RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 MAP4P27816 1152 aaKnown RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 MYLK4Q86YV6 388 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 GCOM2Q9BZD3 368 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 GPHNQ9NQX3 736 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 PKD2L2Q9NZM6 624 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 NDUFA13Q9P0J0 144 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 MAGEA13PA6NCF6 341 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 H0Y626 953 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 TRIM16O95361 564 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 VHLP40337 213 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 ICA1Q05084 483 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 RFFLQ8WZ73 363 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 RANBP17Q9H2T7 1088 aaKnown RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 SYNJ2BP-COX16A0A087WUM0 186 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 M0QZ92 97 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 PSMD14O00487 310 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 IL10P22301 178 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.241e-6■■■■□ 22.3
SYNCRIP-201ENST00000355238 TFDP1Q14186 410 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CYTH1Q15438 398 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CERKLQ49MI3 558 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 ASCC2Q9H1I8 757 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CCDC134Q9H6E4 229 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 C10orf88Q9H8K7 445 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 PPCSQ9HAB8 311 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CYP26B1Q9NR63 512 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 COX16Q9P0S2 106 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 PLEKHG3A1L390 1219 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 KCNH2Q12809 1159 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 KPNB1Q14974 876 aaKnown RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 NCAPHQ15003 741 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CPSF1Q10570 1443 aaKnown RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 RFX1P22670 979 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 BTDP43251 543 aa13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 CTCFP49711 727 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 YWHAHQ04917 246 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZNF564Q8TBZ8 553 aaPredicted RBP13.55□□□□□ -0.24
SYNCRIP-201ENST00000355238 H2AFXP16104 143 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 PSMA2P25787 234 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZNF211Q13398 564 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 KIAA1755Q5JYT7 1200 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 DPF2Q92785 391 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 CDH16O75309 829 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 SUPT3HO75486 399 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ERICH1Q86X53 443 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 DACH2Q96NX9 599 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 TRABDQ9H4I3 376 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ADAM22Q9P0K1 906 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 TEKT2Q9UIF3 430 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ALAS1P13196 640 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 PAMP19021 973 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 DAB2P98082 770 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 CHRNDQ07001 517 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 PDIA2Q13087 525 aaKnown RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ORC2Q13416 577 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 SURF1Q15526 300 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 NCLNQ969V3 563 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 PIGSQ96S52 555 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 KIF2CQ99661 725 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 PUS3Q9BZE2 481 aaKnown RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 SEPT3Q9UH03 358 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 KRT14P02533 472 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ANXA13P27216 316 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 FAM160B1Q5W0V3 765 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 LRRC8BQ6P9F7 803 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 KDM7AQ6ZMT4 941 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 MMGT1Q8N4V1 131 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ROPN1BQ9BZX4 212 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ROPN1Q9HAT0 212 aaPredicted RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 GGT7Q9UJ14 662 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 CCDC195A0A1B0GUA6 201 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 MEIS1O00470 390 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 XPOTO43592 962 aaKnown RBP13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 TTLL1O95922 423 aa13.54□□□□□ -0.24
SYNCRIP-201ENST00000355238 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms