RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 ANKRD40Q6AI12 368 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 LCA5Q86VQ0 697 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 CCNYQ8ND76 341 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 KRT82Q9NSB4 513 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 CCNL1Q9UK58 526 aaPredicted RBP18.66■□□□□ 0.58
SPAST-202ENST00000345662 PFASO15067 1338 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 PITPNM2Q9BZ72 1349 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 PFDN6O15212 129 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 LPXNO60711 386 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 SLC16A2P36021 539 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 SLC18A3Q16572 532 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 TTC13Q8NBP0 860 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 FAF2Q96CS3 445 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 FUCA2Q9BTY2 467 aa18.66■□□□□ 0.58
SPAST-202ENST00000345662 DPYDQ12882 1025 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 TRPV6Q9H1D0 765 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 MRPL40Q9NQ50 206 aaKnown RBP18.65■□□□□ 0.58
SPAST-202ENST00000345662 MED7O43513 233 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 USP6P35125 1406 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 MED21Q13503 144 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 USP17L8P0C7I0 530 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 KIF22Q14807 665 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 TBC1D10BQ4KMP7 808 aaPredicted RBP18.65■□□□□ 0.58
SPAST-202ENST00000345662 AGPAT5Q9NUQ2 364 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 WARS2Q9UGM6 360 aaKnown RBP18.65■□□□□ 0.58
SPAST-202ENST00000345662 WDR64B1ANS9 1081 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 PRPSAP2O60256 369 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 RARS2Q5T160 578 aaKnown RBP18.65■□□□□ 0.58
SPAST-202ENST00000345662 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 DTX3LQ8TDB6 740 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 ATP6V0A1Q93050 837 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 ADAM22Q9P0K1 906 aa18.65■□□□□ 0.58
SPAST-202ENST00000345662 TTC7AQ9ULT0 858 aaPredicted RBP18.65■□□□□ 0.58
SPAST-202ENST00000345662 USP17L3A6NCW0 530 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 USP17L4A6NCW7 530 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 H3BQF6 201 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 ATP2B4P23634 1241 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 ORC2Q13416 577 aaPredicted RBP18.64■□□□□ 0.58
SPAST-202ENST00000345662 DRAP1Q14919 205 aaPredicted RBP18.64■□□□□ 0.58
SPAST-202ENST00000345662 RFX8Q6ZV50 586 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 USP17L1Q7RTZ2 530 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 SFR1Q86XK3 245 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 NUP85Q9BW27 656 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 KLC2Q9H0B6 622 aa18.64■□□□□ 0.58
SPAST-202ENST00000345662 ITKQ08881 620 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 RABGAP1LQ5R372 815 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 PAIP2BQ9ULR5 123 aaKnown RBP18.64■□□□□ 0.57
SPAST-202ENST00000345662 FTLP02792 175 aaPredicted RBP18.64■□□□□ 0.57
SPAST-202ENST00000345662 ARL4AP40617 200 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 IFRD2Q12894 506 aaPredicted RBP18.64■□□□□ 0.57
SPAST-202ENST00000345662 DYNLL2Q96FJ2 89 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 MED10Q9BTT4 135 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 PNMA6FA0A0J9YX94 578 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 RAD51CO43502 376 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 ALX1Q15699 326 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 GLYCTKQ8IVS8 523 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 ENAHQ8N8S7 591 aaPredicted RBP18.64■□□□□ 0.57
SPAST-202ENST00000345662 MYCBPAPQ8TBZ2 947 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 BTBD6Q96KE9 485 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 TMEM51Q9NW97 253 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 TRIM33Q9UPN9 1127 aa18.64■□□□□ 0.57
SPAST-202ENST00000345662 SMG5Q9UPR3 1016 aaKnown RBP18.64■□□□□ 0.57
SPAST-202ENST00000345662 TMEM2Q9UHN6 1383 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 PLA2R1Q13018 1463 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 LRRIQ3A6PVS8 624 aaPredicted RBP18.63■□□□□ 0.57
SPAST-202ENST00000345662 PP2D1A8MPX8 630 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 GSTA4O15217 222 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 KNOP1Q1ED39 458 aaKnown RBP18.63■□□□□ 0.57
SPAST-202ENST00000345662 USPL1Q5W0Q7 1092 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 TMC4Q7Z404 712 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 WWP1Q9H0M0 922 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 ISCUQ9H1K1 167 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 SEC31BQ9NQW1 1179 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 CDHR2Q9BYE9 1310 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 SYNJ2BP-COX16A0A087WUM0 186 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 GOLGA8MH3BSY2 632 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 IGF2BP3O00425 579 aaKnown RBP eCLIP18.63■□□□□ 0.57
SPAST-202ENST00000345662 FCER1AP12319 257 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 ABCD1P33897 745 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 UBXN2AP68543 259 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 HIC1Q14526 733 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 TMEM259Q4ZIN3 620 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 ACAD11Q709F0 780 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 ZBED8Q8IZ13 594 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 KIF2BQ8N4N8 673 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 METTL13Q8N6R0 699 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 ATP11CQ8NB49 1132 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 DDX17Q92841 729 aaKnown RBP18.63■□□□□ 0.57
SPAST-202ENST00000345662 ERP27Q96DN0 273 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 KIFC3Q9BVG8 833 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 COX16Q9P0S2 106 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.63■□□□□ 0.57
SPAST-202ENST00000345662 FOXP2O15409 715 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 MAN1A2O60476 641 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 CDH16O75309 829 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 OCRLQ01968 901 aa18.63■□□□□ 0.57
SPAST-202ENST00000345662 PDIA2Q13087 525 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms