RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 HNRNPLLQ8WVV9 542 aaKnown RBP13.28□□□□□ -0.28
ATXN3-201ENST00000340660 NGRNQ9NPE2 291 aaKnown RBP13.28□□□□□ -0.28
ATXN3-201ENST00000340660 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
ATXN3-201ENST00000340660 FRMPD2Q68DX3 1309 aaPredicted RBP13.28□□□□□ -0.28
ATXN3-201ENST00000340660 FIGNL2A6NMB9 653 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 HYAL3O43820 417 aaPredicted RBP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 LILRA1O75019 489 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 RELBQ01201 579 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 EXOSC9Q06265 439 aaKnown RBP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 KIAA1211LQ6NV74 962 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 NPAS4Q8IUM7 802 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 SDR42E1Q8WUS8 393 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 MRPS27Q92552 414 aaKnown RBP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 DCP1AQ9NPI6 582 aaPredicted RBP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 KLK13Q9UKR3 277 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 MSRB2Q9Y3D2 182 aa13.27□□□□□ -0.29
ATXN3-201ENST00000340660 SPTAN1Q13813 2472 aaKnown RBP13.27□□□□□ -0.29
ATXN3-201ENST00000340660 IDH1O75874 414 aaKnown RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 CHRNA1P02708 482 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 ADD1P35611 737 aaKnown RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 CTSOP43234 321 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 SNAP25P60880 206 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 PTSQ03393 145 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 SIM2Q14190 667 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 LPIN1Q14693 890 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 UBXN2BQ14CS0 331 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 RTN4RL1Q86UN2 441 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 C12orf50Q8NA57 414 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 COLGALT1Q8NBJ5 622 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 SLC2A4RGQ9NR83 387 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 DZANK1Q9NVP4 752 aa13.26□□□□□ -0.29
ATXN3-201ENST00000340660 UBR5O95071 2799 aaPredicted RBP13.26□□□□□ -0.29
ATXN3-201ENST00000340660 GREB1LQ9C091 1923 aaPredicted RBP13.25□□□□□ -0.29
ATXN3-201ENST00000340660 CYP2D7A0A087X1C5 515 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 C17orf102A2RUQ5 167 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 C2orf71A6NGG8 1288 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 FAM170BA6NMN3 283 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 FBXO45P0C2W1 286 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 EPCAMP16422 314 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 MAGEA9P43362 315 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
ATXN3-201ENST00000340660 SLC30A10Q6XR72 485 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 GPR149Q86SP6 731 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 SHDQ96IW2 340 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 INSM2Q96T92 566 aaPredicted RBP13.25□□□□□ -0.29
ATXN3-201ENST00000340660 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
ATXN3-201ENST00000340660 PLCB3Q01970 1234 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 SRSF5Q13243 272 aaKnown RBP13.24□□□□□ -0.29
ATXN3-201ENST00000340660 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
ATXN3-201ENST00000340660 LETM2Q2VYF4 491 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 TTC39AQ5SRH9 613 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 C16orf86Q6ZW13 317 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 MRPL43Q8N983 215 aaKnown RBP13.24□□□□□ -0.29
ATXN3-201ENST00000340660 SPATA18Q8TC71 538 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 OSBPL6Q9BZF3 934 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 NYAP2Q9P242 653 aa13.24□□□□□ -0.29
ATXN3-201ENST00000340660 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 NFIBO00712 420 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 ADH1AP07327 375 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 ZNF806P0C7X5 589 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 ATP8B2P98198 1209 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 MTAPQ13126 283 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 TMC7Q7Z402 723 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 ZNF843Q8N446 348 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 CLDN23Q96B33 292 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 CRNKL1Q9BZJ0 848 aaKnown RBP13.23□□□□□ -0.29
ATXN3-201ENST00000340660 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 EPS15L1Q9UBC2 864 aa13.23□□□□□ -0.29
ATXN3-201ENST00000340660 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
ATXN3-201ENST00000340660 NTRK1P04629 796 aa13.22□□□□□ -0.29
ATXN3-201ENST00000340660 CD72P21854 359 aa13.22□□□□□ -0.29
ATXN3-201ENST00000340660 NRLP54845 237 aa13.22□□□□□ -0.29
ATXN3-201ENST00000340660 RPAP2Q8IXW5 612 aaPredicted RBP13.22□□□□□ -0.29
ATXN3-201ENST00000340660 ZNF395Q9H8N7 513 aaPredicted RBP13.22□□□□□ -0.29
ATXN3-201ENST00000340660 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
ATXN3-201ENST00000340660 RELNP78509 3460 aa13.22□□□□□ -0.29
ATXN3-201ENST00000340660 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 SMIM10L2AP0DMW4 78 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 SMIM10L2BP0DMW5 78 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 CALML3P27482 149 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 GBP2P32456 591 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-201ENST00000340660 WWC1Q8IX03 1113 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 ST13P5Q8NFI4 369 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-201ENST00000340660 PPTC7Q8NI37 304 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 NXPE3Q969Y0 559 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 CRELD1Q96HD1 420 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 KLHL5Q96PQ7 755 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 UBL7Q96S82 380 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-201ENST00000340660 MYADMQ96S97 322 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
ATXN3-201ENST00000340660 CCPG1Q9ULG6 757 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
ATXN3-201ENST00000340660 STAG3L1P0CL83 205 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms