RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 CDC42EP1Q00587 391 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 FAM173BQ6P4H8 233 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 POTEGQ6S5H5 508 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 PIGOQ8TEQ8 1089 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 TMEM40Q8WWA1 233 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 SLC7A3Q8WY07 619 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 CLIC4Q9Y696 253 aa20.5■□□□□ 0.87
HLA-F-217ENST00000334668 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-217ENST00000334668 CD52P31358 61 aa20.49■□□□□ 0.87
HLA-F-217ENST00000334668 CCT6AP40227 531 aaKnown RBP20.49■□□□□ 0.87
HLA-F-217ENST00000334668 POLGP54098 1239 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-217ENST00000334668 EMC2Q15006 297 aa20.49■□□□□ 0.87
HLA-F-217ENST00000334668 IFNLR1Q8IU57 520 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-217ENST00000334668 OSMRQ99650 979 aa20.49■□□□□ 0.87
HLA-F-217ENST00000334668 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
HLA-F-217ENST00000334668 SUCLA2Q9P2R7 463 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-217ENST00000334668 PADI3Q9ULW8 664 aa20.49■□□□□ 0.87
HLA-F-217ENST00000334668 CDH23Q9H251 3354 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 A0A087WWV3 80 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 VWA3AA6NCI4 1184 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 PP2D1A8MPX8 630 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 DGAT1O75907 488 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 ZSCAN22P10073 491 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-217ENST00000334668 KCNJ6P48051 423 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 DEFB103AP81534 67 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 HYIQ5T013 277 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 KRT79Q5XKE5 535 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 SNX29Q8TEQ0 813 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 AK8Q96MA6 479 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 PBX4Q9BYU1 374 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 ERVK-5Q9HDB9 667 aa20.48■□□□□ 0.87
HLA-F-217ENST00000334668 NOC2LQ9Y3T9 749 aaKnown RBP20.48■□□□□ 0.87
HLA-F-217ENST00000334668 EIF4BP23588 611 aaKnown RBP20.47■□□□□ 0.87
HLA-F-217ENST00000334668 CDC25AP30304 524 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 PAK2Q13177 524 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.47■□□□□ 0.875e-7■■□□□ 11.4
HLA-F-217ENST00000334668 ZNF410Q86VK4 478 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 HERC6Q8IVU3 1022 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 USP28Q96RU2 1077 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 PPP1R16BQ96T49 567 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 MTRQ99707 1265 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 FTHL17Q9BXU8 183 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 TMX1Q9H3N1 280 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 GINS2Q9Y248 185 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 PCDHA11Q9Y5I1 949 aa20.47■□□□□ 0.87
HLA-F-217ENST00000334668 TMEM265A0A087WTH1 108 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 SLC26A4O43511 780 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 RPS6KA5O75582 802 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 DARSP14868 501 aaKnown RBP20.46■□□□□ 0.87
HLA-F-217ENST00000334668 DNAJB2P25686 324 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 PBX2P40425 430 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 NASPP49321 788 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-217ENST00000334668 PKP1Q13835 747 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 BECN1Q14457 450 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 GSE1Q14687 1217 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 ODR4Q5SWX8 454 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 RTN4RL1Q86UN2 441 aaPredicted RBP20.46■□□□□ 0.87
HLA-F-217ENST00000334668 FAM228AQ86W67 206 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 KCTD17Q8N5Z5 321 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 TCP11Q8WWU5 503 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 PSPC1Q8WXF1 523 aaKnown RBP20.46■□□□□ 0.87
HLA-F-217ENST00000334668 LINC01599Q8WXQ3 324 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 TMEM143Q96AN5 459 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 ATP6V0A4Q9HBG4 840 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 DDX19AQ9NUU7 478 aaKnown RBP20.46■□□□□ 0.87
HLA-F-217ENST00000334668 ST3GAL5Q9UNP4 418 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 KIAA1024Q9UPX6 916 aa20.46■□□□□ 0.87
HLA-F-217ENST00000334668 ENPP3O14638 875 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 GPR182O15218 404 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 ASAP2O43150 1006 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 F13A1P00488 732 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 LONP1P36776 959 aaKnown RBP20.45■□□□□ 0.86
HLA-F-217ENST00000334668 GRIN1Q05586 938 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 SLC39A14Q15043 492 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 RAB30Q15771 203 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 RHPN2Q8IUC4 686 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 PRPF31Q8WWY3 499 aaKnown RBP20.45■□□□□ 0.86
HLA-F-217ENST00000334668 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 YBX2Q9Y2T7 364 aaKnown RBP20.45■□□□□ 0.86
HLA-F-217ENST00000334668 COL4A3BPQ9Y5P4 624 aa20.45■□□□□ 0.86
HLA-F-217ENST00000334668 A0A087WZ62 844 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 GJB5O95377 273 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 AMHP03971 560 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 ARL2P36404 184 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 RABGGTBP53611 331 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 LAMTOR4Q0VGL1 99 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 KSR1Q8IVT5 923 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 CRIPAKQ8N1N5 446 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 NLRP7Q8WX94 980 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 ZNF668Q96K58 619 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-217ENST00000334668 CCDC43Q96MW1 224 aaKnown RBP20.44■□□□□ 0.86
HLA-F-217ENST00000334668 PNMA5Q96PV4 448 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 FDXACB1Q9BRP7 624 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-217ENST00000334668 GCOM2Q9BZD3 368 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-217ENST00000334668 IFT122Q9HBG6 1241 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 MSRAQ9UJ68 235 aa20.44■□□□□ 0.86
HLA-F-217ENST00000334668 FBXO2Q9UK22 296 aaPredicted RBP20.44■□□□□ 0.86
HLA-F-217ENST00000334668 SRPRBQ9Y5M8 271 aaKnown RBP20.44■□□□□ 0.86
HLA-F-217ENST00000334668 TCHHQ07283 1943 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms