RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NOP53Q9NZM5 478 aaKnown RBP16.46■□□□□ 0.23
VARS2-201ENST00000321897 EPHB6O15197 1021 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 ACSL3O95573 720 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 HERVK_113P62684 666 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 DYNLT1P63172 113 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 WDR93Q6P2C0 686 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 PDXDC1Q6P996 788 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 TRAPPC11Q7Z392 1133 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 FBXL16Q8N461 479 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 PPP1R14CQ8TAE6 165 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 MYCBPAPQ8TBZ2 947 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 KIFAP3Q92845 792 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 CLEC11AQ9Y240 323 aa16.46■□□□□ 0.23
VARS2-201ENST00000321897 ATMINO43313 823 aaPredicted RBP16.45■□□□□ 0.22
VARS2-201ENST00000321897 EVI5O60447 810 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 TRPC3Q13507 836 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 CNKSR1Q969H4 720 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 A0A1W2PQC6 194 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 SYF2O95926 243 aaKnown RBP16.45■□□□□ 0.22
VARS2-201ENST00000321897 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 BSPRYQ5W0U4 402 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 ARHGAP20Q9P2F6 1191 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 MED24O75448 989 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 GYS1P13807 737 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 PPP2R5DQ14738 602 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 CYB5D1Q6P9G0 228 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 CNPY4Q8N129 248 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 ARMC2Q8NEN0 867 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 DEPTORQ8TB45 409 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 CELF4Q9BZC1 486 aaKnown RBP16.45■□□□□ 0.22
VARS2-201ENST00000321897 IQCGQ9H095 443 aaKnown RBP16.45■□□□□ 0.22
VARS2-201ENST00000321897 IKZF4Q9H2S9 585 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 KBTBD4Q9NVX7 518 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 CEP72Q9P209 647 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 FER1L4A9Z1Z3 1794 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 BAG2O95816 211 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 C7orf25Q9BPX7 421 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
VARS2-201ENST00000321897 TRIM4Q9C037 500 aa16.45■□□□□ 0.22
VARS2-201ENST00000321897 IPO5O00410 1097 aaKnown RBP16.44■□□□□ 0.22
VARS2-201ENST00000321897 SPP2Q13103 211 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PTGISQ16647 500 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 CATSPER3Q86XQ3 398 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 GBP5Q96PP8 586 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 NAP1L3Q99457 506 aaPredicted RBP16.44■□□□□ 0.22
VARS2-201ENST00000321897 LXNQ9BS40 222 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 KIFC3Q9BVG8 833 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 HSD3B7Q9H2F3 369 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 FAM114A2Q9NRY5 505 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PSMD14O00487 310 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 NAALADL2Q58DX5 795 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PPP1R18Q6NYC8 613 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PADI6Q6TGC4 694 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.44■□□□□ 0.22
VARS2-201ENST00000321897 MED15Q96RN5 788 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 TMEM39BQ9GZU3 492 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 VPS37BQ9H9H4 285 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 NFAT5O94916 1531 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PDE2AO00408 941 aaPredicted RBP16.44■□□□□ 0.22
VARS2-201ENST00000321897 POLGP54098 1239 aaPredicted RBP16.44■□□□□ 0.22
VARS2-201ENST00000321897 PTK2Q05397 1052 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PSMD2Q13200 908 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 DMP1Q13316 513 aaPredicted RBP16.44■□□□□ 0.22
VARS2-201ENST00000321897 NSMCE1Q8WV22 266 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 DUSP9Q99956 384 aaKnown RBP16.44■□□□□ 0.22
VARS2-201ENST00000321897 VCXQ9H320 206 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 IRAK4Q9NWZ3 460 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 USP20Q9Y2K6 914 aa16.44■□□□□ 0.22
VARS2-201ENST00000321897 RCCD1A6NED2 376 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 POC1B-GALNT4F8VUJ3 575 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 FERP16591 822 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 SMAD1Q15797 465 aaKnown RBP16.43■□□□□ 0.22
VARS2-201ENST00000321897 HHATQ5VTY9 493 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 TSEN2Q8NCE0 465 aaKnown RBP16.43■□□□□ 0.22
VARS2-201ENST00000321897 SLC30A5Q8TAD4 765 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 SEC16BQ96JE7 1060 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 KMT5AQ9NQR1 393 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 PDE6CP51160 858 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 KCNA1Q09470 495 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 PSMD1Q99460 953 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 TRIM51Q9BSJ1 452 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 NXF1Q9UBU9 619 aaKnown RBP16.43■□□□□ 0.22
VARS2-201ENST00000321897 PDS5AQ29RF7 1337 aaKnown RBP16.43■□□□□ 0.22
VARS2-201ENST00000321897 UCHL3P15374 230 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 TBX2Q13207 712 aaPredicted RBP16.43■□□□□ 0.22
VARS2-201ENST00000321897 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
VARS2-201ENST00000321897 NPEPPSP55786 919 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 PODNQ7Z5L7 613 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms