RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ANKRD23Q86SG2 305 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 FAM186BQ8IYM0 893 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 SYCP3Q8IZU3 236 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 SMCR8Q8TEV9 937 aaPredicted RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 ZNF592Q92610 1267 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 SLC35C1Q96A29 364 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 L2HGDHQ9H9P8 463 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 GBA2Q9HCG7 927 aaPredicted RBP11.62□□□□□ -0.55
CLP1-201ENST00000302731 ZNF302Q9NR11 478 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 MYO1AQ9UBC5 1043 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 EXOC7Q9UPT5 735 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 DAAM1Q9Y4D1 1078 aa11.62□□□□□ -0.55
CLP1-201ENST00000302731 EIF3CLB5ME19 914 aaKnown RBP11.61□□□□□ -0.55
CLP1-201ENST00000302731 EPHB6O15197 1021 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 NOL4O94818 638 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
CLP1-201ENST00000302731 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
CLP1-201ENST00000302731 CASP4P49662 377 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 FSTL1Q12841 308 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 FAM102BQ5T8I3 360 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 PDXDC1Q6P996 788 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 METTL7BQ6UX53 244 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 MAEAQ7L5Y9 396 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 GPRC5AQ8NFJ5 357 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 AFAP1L1Q8TED9 768 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 FGD4Q96M96 766 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 EIF3CQ99613 913 aaKnown RBP11.61□□□□□ -0.55
CLP1-201ENST00000302731 NIFKQ9BYG3 293 aaKnown RBP11.61□□□□□ -0.55
CLP1-201ENST00000302731 ATP6V0A4Q9HBG4 840 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 MYO6Q9UM54 1294 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 ARID2Q68CP9 1835 aa11.61□□□□□ -0.55
CLP1-201ENST00000302731 SSU72P8A0A1W2PR75 194 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 TMEM150BA6NC51 233 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 ASB14A6NK59 587 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 SOCS7O14512 581 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 CTIFO43310 598 aaKnown RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 OATP04181 439 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 NPTX2P47972 431 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 PEX3P56589 373 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 FAM160B1Q5W0V3 765 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 GBP6Q6ZN66 633 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 MAP4K3Q8IVH8 894 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 C2orf69Q8N8R5 385 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 TMEM161BQ8NDZ6 487 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 SEPT1Q8WYJ6 367 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 LSM14BQ9BX40 385 aaKnown RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 GANQ9H2C0 597 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 NHEJ1Q9H9Q4 299 aaPredicted RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 MORF4L1Q9UBU8 362 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 SEPT9Q9UHD8 586 aaPredicted RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 DNAI1Q9UI46 699 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 DDX41Q9UJV9 622 aaKnown RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 GSTTP1A0A1W2PQM5 241 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 LRRC53A6NM62 1247 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 PDHXO00330 501 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 KIF5CO60282 957 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 LCA5LO95447 670 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 GNG11P61952 73 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 CCL15Q16663 113 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 EXOC3L4Q17RC7 722 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 INTS8Q75QN2 995 aaKnown RBP11.6□□□□□ -0.55
CLP1-201ENST00000302731 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 ACRBPQ8NEB7 543 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 FAM167AQ96KS9 214 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 CCDC42Q96M95 316 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 ZNF408Q9H9D4 720 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 GPRC5CQ9NQ84 441 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 KMT5AQ9NQR1 393 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 XPNPEP1Q9NQW7 623 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 NRBP2Q9NSY0 501 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 AIPL1Q9NZN9 384 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 TBX20Q9UMR3 447 aa11.6□□□□□ -0.55
CLP1-201ENST00000302731 MYH9P35579 1960 aaKnown RBP11.59□□□□□ -0.55
CLP1-201ENST00000302731 DOCK5Q9H7D0 1870 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 BTBD19C9JJ37 291 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 SLC16A4O15374 487 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 P4HA2O15460 535 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 STRNO43815 780 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 EXOC3O60645 756 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 GGPS1O95749 300 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 ATP4AP20648 1035 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 PON1P27169 355 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 RFC5P40937 340 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 ARHGAP25P42331 645 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 SP4Q02446 784 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 ENPEPQ07075 957 aa11.59□□□□□ -0.55
CLP1-201ENST00000302731 DCAF17Q5H9S7 520 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms