RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 UBE2Q2LH0YL09 131 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 STK25O00506 426 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 NHEJ1Q9H9Q4 299 aaPredicted RBP19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 FCGRTP55899 365 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 PIDD1Q9HB75 910 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 EPB41L4AQ9HCS5 686 aaPredicted RBP19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 ADAM22Q9P0K1 906 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 SUCLA2Q9P2R7 463 aaPredicted RBP19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 PGRMC1O00264 195 aaKnown RBP19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 EPHB1P54762 984 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 RPS6KA2Q15349 733 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 OGFRQ9NZT2 677 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 AGO2Q9UKV8 859 aaKnown RBP19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 HIP1RO75146 1068 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 STX2P32856 288 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 PPP2R3CQ969Q6 453 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 ATG4CQ96DT6 458 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 RNF14Q9UBS8 474 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 PPP2R3BQ9Y5P8 575 aa19.04■□□□□ 0.64
CDC42EP3-201ENST00000295324 IER5Q5VY09 327 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 KRT39Q6A163 491 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 DARS2Q6PI48 645 aaKnown RBP19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 CAPN12Q6ZSI9 719 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 B4GALNT4Q76KP1 1039 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 SCYL1Q96KG9 808 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 POLD4Q9HCU8 107 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 SCAF8Q9UPN6 1271 aaKnown RBP19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 FER1L4A9Z1Z3 1794 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 CCDC62Q6P9F0 684 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 GPD1LQ8N335 351 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 CAP2P40123 477 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 PRPF31Q8WWY3 499 aaKnown RBP19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 RBAKQ9NYW8 714 aaPredicted RBP19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 LCMT1Q9UIC8 334 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 TRAPPC3O43617 180 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 DUOXA2Q1HG44 320 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 ANKRD20A3Q5VUR7 823 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 TMEM270Q6UE05 265 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 NDUFAF2Q8N183 169 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 SLC35F6Q8N357 371 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 CCHCR1Q8TD31 782 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 STRIP2Q9ULQ0 834 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 PIN4Q9Y237 131 aaKnown RBP19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 SPDYE2BA6NHP3 402 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 EFCAB8A8MWE9 144 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 SPDYE6P0CI01 402 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 PSMA2P25787 234 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 CXCL9Q07325 125 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 CCDC13Q8IYE1 715 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 GANCQ8TET4 914 aa19.03■□□□□ 0.64
CDC42EP3-201ENST00000295324 ADGRB1O14514 1584 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 PLSCR1O15162 318 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 PRKCBP05771 671 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 DYNLT1P63172 113 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 KCNH2Q12809 1159 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 VSIG1Q86XK7 387 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 PBKQ96KB5 322 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 ADAMTS1Q9UHI8 967 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 DAAM1Q9Y4D1 1078 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 TNS2Q63HR2 1409 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 SKIV2LQ15477 1246 aaKnown RBP19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 PGBD4Q96DM1 585 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 CDC23Q9UJX2 597 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 PP2D1A8MPX8 630 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 SAT1P21673 171 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 KLRK1P26718 216 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 PDE1BQ01064 536 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 MAP7Q14244 749 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 TTC31Q49AM3 519 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 KIF12Q96FN5 646 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 ACAP3Q96P50 834 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 GBA2Q9HCG7 927 aaPredicted RBP19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 FAM114A2Q9NRY5 505 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 MAP3K20Q9NYL2 800 aaKnown RBP19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 CEP72Q9P209 647 aa19.02■□□□□ 0.64
CDC42EP3-201ENST00000295324 ITSN1Q15811 1721 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 GUCY1A2P33402 732 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 PRCPP42785 496 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 RNF219Q5W0B1 726 aaPredicted RBP19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 PANX2Q96RD6 677 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 PHF20Q9BVI0 1012 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 PTPN22Q9Y2R2 807 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 TACC3Q9Y6A5 838 aa19.02■□□□□ 0.63
CDC42EP3-201ENST00000295324 F8W8V4 182 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 STXBP3O00186 592 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 SLC26A4O43511 780 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 ECEL1O95672 775 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 CALB1P05937 261 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 RECQLP46063 649 aaPredicted RBP19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 STMN2Q93045 179 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 RGL1Q9NZL6 768 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 CEP85LQ5SZL2 805 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 PHLDB2Q86SQ0 1253 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 ANKRD42Q8N9B4 389 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 RNF40O75150 1001 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 S100BP04271 92 aaPredicted RBP19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 GSTA1P08263 222 aa19.01■□□□□ 0.63
CDC42EP3-201ENST00000295324 GSTA2P09210 222 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms