RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 ZHX2Q9Y6X8 837 aa20.01■□□□□ 0.79
SHKBP1-201ENST00000291842 F8VZ95 297 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 DHX15O43143 795 aaKnown RBP20■□□□□ 0.79
SHKBP1-201ENST00000291842 CAPN2P17655 700 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 GUCY2CP25092 1073 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 MRPS9P82933 396 aaKnown RBP20■□□□□ 0.79
SHKBP1-201ENST00000291842 DRAP1Q14919 205 aaPredicted RBP20■□□□□ 0.79
SHKBP1-201ENST00000291842 RPS6KA1Q15418 735 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 TKFCQ3LXA3 575 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 C10orf76Q5T2E6 689 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 STXBP4Q6ZWJ1 553 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 GLYCTKQ8IVS8 523 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 TAF4BQ92750 862 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 DMAC2Q9NW81 257 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 KIF13BQ9NQT8 1826 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 STAT1P42224 750 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 DLG4P78352 724 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 GUCY2DQ02846 1103 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 ARHGAP44Q17R89 818 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 LNX1Q8TBB1 728 aaPredicted RBP20■□□□□ 0.79
SHKBP1-201ENST00000291842 IFT81Q8WYA0 676 aa20■□□□□ 0.79
SHKBP1-201ENST00000291842 GOLGA6BA6NDN3 693 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 LRRN2O75325 713 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 HEXIM1O94992 359 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 MUTP22033 750 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 CARSP49589 748 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 SPP2Q13103 211 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 VPS36Q86VN1 386 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 KLHL7Q8IXQ5 586 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 LRRC57Q8N9N7 239 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 MTMR14Q8NCE2 650 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 TAAR1Q96RJ0 339 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 EPB41L5Q9HCM4 733 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 PSD3Q9NYI0 1048 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 KCND2Q9NZV8 630 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 RNF14Q9UBS8 474 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 SRCAPQ6ZRS2 3230 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 KIF4AO95239 1232 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 H2AFZP0C0S5 128 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 MYCLP12524 364 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 FERP16591 822 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 SOX5P35711 763 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 TRADDQ15628 312 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 NFIL3Q16649 462 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 H2AFVQ71UI9 128 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 TSEN2Q8NCE0 465 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 PROCA1Q8NCQ7 364 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 ZSWIM2Q8NEG5 633 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 TPCN2Q8NHX9 752 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 ZBED3Q96IU2 234 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 MKNK1Q9BUB5 465 aa19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 INTS2Q9H0H0 1204 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 AGO4Q9HCK5 861 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-201ENST00000291842 RPTORQ8N122 1335 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 BTNL10A8MVZ5 291 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 P4HBP07237 508 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 MTMR1Q13613 665 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 NFU1Q9UMS0 254 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 NENFQ9UMX5 172 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 ASTN2O75129 1339 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 CEP104O60308 925 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 PPP1R37O75864 691 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 GALCP54803 685 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 MYL7Q01449 175 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 BFSP1Q12934 665 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 ZSCAN26Q16670 478 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 USP38Q8NB14 1042 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 SYTL5Q8TDW5 730 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 STRA6Q9BX79 667 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 STK33Q9BYT3 514 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 GPR88Q9GZN0 384 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 GPRC5CQ9NQ84 441 aa19.98■□□□□ 0.79
SHKBP1-201ENST00000291842 UBE4BO95155 1302 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 FAM153BP0C7A2 387 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 ABCB4P21439 1286 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 RARRES1P49788 294 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 EPHB4P54760 987 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 RPS6P62753 249 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 MAP3K10Q02779 954 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 TNIP1Q15025 636 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 UGCGQ16739 394 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 FAM153CQ494X1 144 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 DEFB132Q7Z7B7 95 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 OLIG1Q8TAK6 271 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 CBWD1Q9BRT8 395 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 OSGEPQ9NPF4 335 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 SEPT11Q9NVA2 429 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 FAM153AQ9UHL3 310 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 ATP9AO75110 1047 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 BCRP11274 1271 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 PHLDB3Q6NSJ2 640 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 AP1M1Q9BXS5 423 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 UBIAD1Q9Y5Z9 338 aa19.97■□□□□ 0.79
SHKBP1-201ENST00000291842 WDR46O15213 610 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-201ENST00000291842 MTMR2Q13614 643 aa19.96■□□□□ 0.79
SHKBP1-201ENST00000291842 GLE1Q53GS7 698 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-201ENST00000291842 CIAPIN1Q6FI81 312 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms