RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 EIF4BP23588 611 aaKnown RBP28.4■■■□□ 2.14
U2AF1-201ENST00000291552 ANAPC15P60006 121 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 LETM2Q2VYF4 491 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 PUS10Q3MIT2 529 aaKnown RBP28.4■■■□□ 2.14
U2AF1-201ENST00000291552 MTERF2Q49AM1 385 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 XKR3Q5GH77 459 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 GJD3Q8N144 294 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 C1QTNF1Q9BXJ1 281 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 CWH43Q9H720 699 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 ELAC1Q9H777 363 aaKnown RBP28.4■■■□□ 2.14
U2AF1-201ENST00000291552 KCNMB3Q9NPA1 279 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 VAV3Q9UKW4 847 aa28.4■■■□□ 2.14
U2AF1-201ENST00000291552 IGKV6-21A0A0C4DH24 114 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 NCK2O43639 380 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 LARGE1O95461 756 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 DARSP14868 501 aaKnown RBP28.39■■■□□ 2.14
U2AF1-201ENST00000291552 FGFR4P22455 802 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 CLUL1Q15846 466 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 EARS2Q5JPH6 523 aaKnown RBP28.39■■■□□ 2.14
U2AF1-201ENST00000291552 IGFLR1Q9H665 355 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 ATP6V0A4Q9HBG4 840 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 C11orf16Q9NQ32 467 aa28.39■■■□□ 2.14
U2AF1-201ENST00000291552 TYW1Q9NV66 732 aaKnown RBP28.39■■■□□ 2.14
U2AF1-201ENST00000291552 COLGALT1Q8NBJ5 622 aa28.38■■■□□ 2.13
U2AF1-201ENST00000291552 CCDC194A0A1B0GVG4 234 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 FAM205CA6NFA0 338 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 CSDE1O75534 798 aaKnown RBP28.37■■■□□ 2.13
U2AF1-201ENST00000291552 FDPSP14324 419 aaKnown RBP28.37■■■□□ 2.13
U2AF1-201ENST00000291552 ADAM15Q13444 863 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 LRRC55Q6ZSA7 311 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 ANO5Q75V66 913 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 NEK8Q86SG6 692 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 ZNF710Q8N1W2 664 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 CASD1Q96PB1 797 aa28.37■■■□□ 2.13
U2AF1-201ENST00000291552 RNF216Q9NWF9 866 aaPredicted RBP28.37■■■□□ 2.13
U2AF1-201ENST00000291552 ZP2Q05996 745 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 PPP2R5CQ13362 524 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 PLA2G4FQ68DD2 849 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 ECHDC2Q86YB7 292 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 NECAB1Q8N987 351 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 HAS1Q92839 578 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 TMEM117Q9H0C3 514 aa28.36■■■□□ 2.13
U2AF1-201ENST00000291552 WRAP73Q9P2S5 460 aaPredicted RBP28.36■■■□□ 2.13
U2AF1-201ENST00000291552 ORC3Q9UBD5 711 aaPredicted RBP28.36■■■□□ 2.13
U2AF1-201ENST00000291552 ATF7P17544 494 aaPredicted RBP28.35■■■□□ 2.13
U2AF1-201ENST00000291552 SPOUT1Q5T280 376 aaKnown RBP28.35■■■□□ 2.13
U2AF1-201ENST00000291552 PPP4R3AQ6IN85 833 aa28.35■■■□□ 2.13
U2AF1-201ENST00000291552 PIK3AP1Q6ZUJ8 805 aa28.35■■■□□ 2.13
U2AF1-201ENST00000291552 NLRP7Q8WX94 980 aa28.35■■■□□ 2.13
U2AF1-201ENST00000291552 SCLT1Q96NL6 688 aa28.35■■■□□ 2.13
U2AF1-201ENST00000291552 LRFN3Q9BTN0 628 aa28.35■■■□□ 2.13
U2AF1-201ENST00000291552 PCDHB12Q9Y5F1 795 aa28.35■■■□□ 2.13
U2AF1-201ENST00000291552 DDX11L8A8MPP1 907 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 PI4K2BG5E9Z4 385 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 MBTPS2O43462 519 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 FGF18O76093 207 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 GLP2RO95838 553 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 GCFC2P16383 781 aaKnown RBP28.34■■■□□ 2.13
U2AF1-201ENST00000291552 SSTR3P32745 418 aaPredicted RBP28.34■■■□□ 2.13
U2AF1-201ENST00000291552 NRIP1P48552 1158 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 PSMC5P62195 406 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 ME3Q16798 604 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 CLLU1OSQ5K130 101 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 ZNF598Q86UK7 904 aaKnown RBP28.34■■■□□ 2.13
U2AF1-201ENST00000291552 POTEDQ86YR6 584 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 TNFRSF25Q93038 417 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 MSLNLQ96KJ4 702 aa28.34■■■□□ 2.13
U2AF1-201ENST00000291552 FAM86C2PA6NEL3 165 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 MAFO75444 373 aaPredicted RBP28.33■■■□□ 2.13
U2AF1-201ENST00000291552 UBE3AQ05086 875 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 NR5A1Q13285 461 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 SMAD2Q15796 467 aaKnown RBP28.33■■■□□ 2.13
U2AF1-201ENST00000291552 EFHBQ8N7U6 833 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 ZNF579Q8NAF0 562 aaKnown RBP28.33■■■□□ 2.13
U2AF1-201ENST00000291552 GTF3C6Q969F1 213 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 FAM20AQ96MK3 541 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 AAASQ9NRG9 546 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 CLEC1BQ9P126 229 aa28.33■■■□□ 2.13
U2AF1-201ENST00000291552 TRIOO75962 3097 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 A0A087WZ62 844 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 C19orf67A6NJJ6 358 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 CCNT1O60563 726 aaKnown RBP28.32■■■□□ 2.12
U2AF1-201ENST00000291552 ZSCAN20P17040 1043 aaPredicted RBP28.32■■■□□ 2.12
U2AF1-201ENST00000291552 XBP1P17861 261 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 LAG3P18627 525 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 ERVFC1P60507 584 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 ANKRD1Q15327 319 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 THNSL1Q8IYQ7 743 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 FDXACB1Q9BRP7 624 aaPredicted RBP28.32■■■□□ 2.12
U2AF1-201ENST00000291552 TLR9Q9NR96 1032 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 PRKAG3Q9UGI9 489 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 FAM50BQ9Y247 325 aa28.32■■■□□ 2.12
U2AF1-201ENST00000291552 FSCN2O14926 492 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 PBX3P40426 434 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 QARSP47897 775 aaKnown RBP28.31■■■□□ 2.12
U2AF1-201ENST00000291552 NPEPPSP55786 919 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 SPIRE1Q08AE8 756 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 SMAD4Q13485 552 aaKnown RBP28.31■■■□□ 2.12
U2AF1-201ENST00000291552 ERICH6BQ5W0A0 696 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 RBM23Q86U06 439 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms