RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 LARP4BQ92615 738 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 NOVA2Q9UNW9 492 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 MFN2O95140 757 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 PRAMEP78395 509 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 MFSD4BQ5TF39 518 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 CCSAPQ6IQ19 270 aaPredicted RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 NEK10Q6ZWH5 1172 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 NLRP14Q86W24 1093 aa16.78■□□□□ 0.28
UBR3-201ENST00000272793 GPBP1L1Q9HC44 474 aaPredicted RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 IARS2Q9NSE4 1012 aaKnown RBP16.78■□□□□ 0.28
UBR3-201ENST00000272793 BTN3A2P78410 334 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 ECT2Q9H8V3 914 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 POLG2Q9UHN1 485 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 CHMP2BQ9UQN3 213 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 PIK3R2O00459 728 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 SOX11P35716 441 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 CYLC2Q14093 348 aaPredicted RBP16.77■□□□□ 0.28
UBR3-201ENST00000272793 MCTP2Q6DN12 878 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 REXO1Q8N1G1 1221 aaKnown RBP16.77■□□□□ 0.28
UBR3-201ENST00000272793 POMGNT2Q8NAT1 580 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 TRIM54Q9BYV2 358 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 MYO1CO00159 1063 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 ETF1P62495 437 aaKnown RBP16.77■□□□□ 0.28
UBR3-201ENST00000272793 SYTL3Q4VX76 610 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 ADAM21Q9UKJ8 722 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 DOLKQ9UPQ8 538 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 HNRNPRO43390 633 aaKnown RBP16.77■□□□□ 0.28
UBR3-201ENST00000272793 TBC1D9BQ66K14 1250 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 RIN3Q8TB24 985 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 ZWILCHQ9H900 591 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 SLC39A2Q9NP94 309 aa16.77■□□□□ 0.28
UBR3-201ENST00000272793 CLASP2O75122 1294 aaKnown RBP16.77■□□□□ 0.27
UBR3-201ENST00000272793 TRIM16LQ309B1 348 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 ADALQ6DHV7 355 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 MICALL2Q8IY33 904 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 CAPN10Q9HC96 672 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 CSNK2BP67870 215 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.27
UBR3-201ENST00000272793 ANAPC7Q9UJX3 599 aa16.77■□□□□ 0.27
UBR3-201ENST00000272793 RALBP11234 206 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 C11orf96Q7Z7L8 435 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 EPHB4P54760 987 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 MEI1Q5TIA1 1274 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 KPNA7A9QM74 516 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 AKAP10O43572 662 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 ERFP50548 548 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 ODR4Q5SWX8 454 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 CCNYL1Q8N7R7 359 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 RTCBQ9Y3I0 505 aaKnown RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 TFAP4Q01664 338 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 GRSF1Q12849 480 aaKnown RBP eCLIP16.76■□□□□ 0.27
UBR3-201ENST00000272793 BBS9Q3SYG4 887 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 MLNP12872 115 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 TNFAIP2Q03169 654 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 ERAP1Q9NZ08 941 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 CDH2P19022 906 aaPredicted RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 DHX9Q08211 1270 aaKnown RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 FCHO2Q0JRZ9 810 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 FAM45BPQ6NSW5 357 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 COMMD2Q86X83 199 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 SIX6OS1Q8N1H7 587 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 ARL8AQ96BM9 186 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 RAD21L1Q9H4I0 556 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 KLHL8Q9P2G9 620 aaPredicted RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 CSADQ9Y600 493 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 FRMPD2Q68DX3 1309 aaPredicted RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 BZW1Q7L1Q6 419 aaKnown RBP16.76■□□□□ 0.27
UBR3-201ENST00000272793 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
UBR3-201ENST00000272793 RASA4BC9J798 803 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 RASA4O43374 803 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 SERPINB4P48594 390 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 MFAP3P55082 362 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 MMRN1Q13201 1228 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 SGSM1Q2NKQ1 1148 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 IZUMO1Q8IYV9 350 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 FARP1Q9Y4F1 1045 aaPredicted RBP16.75■□□□□ 0.27
UBR3-201ENST00000272793 MSH6P52701 1360 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 NNMTP40261 264 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 RABGGTAQ92696 567 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 CCDC51Q96ER9 411 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 RBM17Q96I25 401 aaKnown RBP16.75■□□□□ 0.27
UBR3-201ENST00000272793 IQCMA0A1B0GVH7 501 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 DNAJC24Q6P3W2 148 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 TMA16Q96EY4 203 aaKnown RBP16.75■□□□□ 0.27
UBR3-201ENST00000272793 VPS11Q9H270 941 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 SCN3BQ9NY72 215 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 ARL3P36405 182 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 TFAMQ00059 246 aaKnown RBP16.75■□□□□ 0.27
UBR3-201ENST00000272793 CHSY1Q86X52 802 aa16.75■□□□□ 0.27
UBR3-201ENST00000272793 DYRK4Q9NR20 520 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms