RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 LMTK3Q96Q04 1460 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 LRRC10BA6NIK2 292 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 NOL3O60936 208 aaKnown RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 AMPD2Q01433 879 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 DHX34Q14147 1143 aaKnown RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 ASPRV1Q53RT3 343 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 ANKRD20A8PQ5CZ79 823 aa17.42■□□□□ 0.38
SREBF1-201ENST00000261646 TMED8Q6PL24 325 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 PRPF38AQ8NAV1 312 aaKnown RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 FAM217BQ9NTX9 383 aaPredicted RBP17.42■□□□□ 0.38
SREBF1-201ENST00000261646 FAM237AA0A1B0GTK4 181 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 FTLP02792 175 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-201ENST00000261646 UCHL3P15374 230 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 IRX4P78413 519 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 HIPK4Q8NE63 616 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 CALR3Q96L12 384 aaKnown RBP17.41■□□□□ 0.38
SREBF1-201ENST00000261646 PACSIN1Q9BY11 444 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 TMEM120BA0PK00 339 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 RNF225M0QZC1 329 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-201ENST00000261646 CAND2O75155 1236 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 LMNAP02545 664 aaKnown RBP17.41■□□□□ 0.38
SREBF1-201ENST00000261646 TROAPQ12815 778 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 RNF207Q6ZRF8 634 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 DTX3LQ8TDB6 740 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 C1orf54Q8WWF1 131 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 ERP27Q96DN0 273 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 FAF1Q9UNN5 650 aaPredicted RBP17.41■□□□□ 0.38
SREBF1-201ENST00000261646 CFAP69A5D8W1 941 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 SMIM22K7EJ46 135 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 MT-ND3P03897 115 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 PLS3P13797 630 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 MFAP3P55082 362 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 OGFOD1Q8N543 542 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 MAML1Q92585 1016 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 NT5C1BQ96P26 610 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 ERP44Q9BS26 406 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 MEGF6O75095 1541 aa17.41■□□□□ 0.38
SREBF1-201ENST00000261646 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-201ENST00000261646 LMNB2Q03252 620 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 KNOP1Q1ED39 458 aaKnown RBP17.4■□□□□ 0.38
SREBF1-201ENST00000261646 KLHDC7AQ5VTJ3 777 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-201ENST00000261646 RCCD1A6NED2 376 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 CASQ2O14958 399 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-201ENST00000261646 GPC5P78333 572 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 WDR78Q5VTH9 848 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 JAMLQ86YT9 394 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 FGD4Q96M96 766 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 TTC1Q99614 292 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 FAM53CQ9NYF3 392 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 FIGNQ5HY92 759 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 TTBK2Q6IQ55 1244 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 C3orf20Q8ND61 904 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 TRIM55Q9BYV6 548 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 ATP6V0A4Q9HBG4 840 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 USP40Q9NVE5 1235 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 ANGPTL2Q9UKU9 493 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 TTC7AQ9ULT0 858 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-201ENST00000261646 GAP43P17677 238 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 MXI1P50539 228 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 FBXO11Q86XK2 927 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 SLC35G2Q8TBE7 412 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
SREBF1-201ENST00000261646 MIEF2Q96C03 454 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 TUBB6Q9BUF5 446 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 LEMD3Q9Y2U8 911 aa17.4■□□□□ 0.38
SREBF1-201ENST00000261646 POTEFA5A3E0 1075 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 ATP6V1G2O95670 118 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 POTEIP0CG38 1075 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 KCNJ1P48048 391 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 BSPRYQ5W0U4 402 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 TMEM154Q6P9G4 183 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 POTEGQ6S5H5 508 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 KIAA0825Q8IV33 1275 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 PARVGQ9HBI0 331 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 CNTNAP5Q8WYK1 1306 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 ZNF233A6NK53 670 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 HAUS5O94927 633 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 NQO1P15559 274 aaKnown RBP17.39■□□□□ 0.37
SREBF1-201ENST00000261646 BRD2P25440 801 aaKnown RBP17.39■□□□□ 0.37
SREBF1-201ENST00000261646 CDK8P49336 464 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 UBXN2AP68543 259 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 GRM4Q14833 912 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 BBS9Q3SYG4 887 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 DNAAF5Q86Y56 855 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 TTC17Q96AE7 1141 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-201ENST00000261646 HSD3B7Q9H2F3 369 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 DLGAP2Q9P1A6 1054 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.39■□□□□ 0.37
SREBF1-201ENST00000261646 CREB3O43889 395 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 UBOX5O94941 541 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
SREBF1-201ENST00000261646 ANAPC7Q9UJX3 599 aa17.39■□□□□ 0.37
SREBF1-201ENST00000261646 WTIPA6NIX2 430 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms