RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 ERMNQ8TAM6 284 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 DYDC1Q8WWB3 177 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 KAT5Q92993 513 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 DYDC2Q96IM9 177 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 PBKQ96KB5 322 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 PPP1R12BO60237 982 aaPredicted RBP14.35□□□□□ -0.11
PGBD1-201ENST00000259883 CHN1P15882 459 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 SSTR3P32745 418 aaPredicted RBP14.35□□□□□ -0.11
PGBD1-201ENST00000259883 SLC29A2Q14542 456 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 CDC42EP5Q6NZY7 148 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 CNPY4Q8N129 248 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 ZSWIM2Q8NEG5 633 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 SYN2Q92777 582 aaPredicted RBP14.35□□□□□ -0.11
PGBD1-201ENST00000259883 MRRFQ96E11 262 aaKnown RBP14.35□□□□□ -0.11
PGBD1-201ENST00000259883 DAAM1Q9Y4D1 1078 aa14.35□□□□□ -0.11
PGBD1-201ENST00000259883 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 ABCB11O95342 1321 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 TCRBV7S2A1N4TA0A589 114 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 H0YGN5 161 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 ACSL3O95573 720 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 MMEP08473 750 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 TNFRSF8P28908 595 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 CUL1Q13616 776 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 HIBCHQ6NVY1 386 aaPredicted RBP14.34□□□□□ -0.11
PGBD1-201ENST00000259883 PSMD1Q99460 953 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 EIF2AK1Q9BQI3 630 aaKnown RBP14.34□□□□□ -0.11
PGBD1-201ENST00000259883 SEMA4AQ9H3S1 761 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 SIX2Q9NPC8 291 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 NFS1Q9Y697 457 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 CCDC88AQ3V6T2 1871 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 DDTLA6NHG4 134 aaPredicted RBP14.34□□□□□ -0.11
PGBD1-201ENST00000259883 F8VZ95 297 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 MEIS2O14770 477 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 MSH4O15457 936 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 GCLMP48507 274 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 CERKLQ49MI3 558 aaPredicted RBP14.34□□□□□ -0.11
PGBD1-201ENST00000259883 ODR4Q5SWX8 454 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 CCDC91Q7Z6B0 441 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 SLF2Q8IX21 1173 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 UBE2TQ9NPD8 197 aaPredicted RBP14.34□□□□□ -0.11
PGBD1-201ENST00000259883 TBK1Q9UHD2 729 aa14.34□□□□□ -0.11
PGBD1-201ENST00000259883 TMEM150BA6NC51 233 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 FOXN3O00409 490 aaPredicted RBP14.33□□□□□ -0.11
PGBD1-201ENST00000259883 RPL13P26373 211 aaKnown RBP14.33□□□□□ -0.11
PGBD1-201ENST00000259883 CDC25CP30307 473 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 DLG4P78352 724 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 ICA1Q05084 483 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 TNIP1Q15025 636 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 GKAP1Q5VSY0 366 aaPredicted RBP14.33□□□□□ -0.11
PGBD1-201ENST00000259883 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 SEPT14Q6ZU15 432 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 TBC1D1Q86TI0 1168 aaPredicted RBP14.33□□□□□ -0.11
PGBD1-201ENST00000259883 GIMAP7Q8NHV1 300 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 PRMT1Q99873 361 aaKnown RBP14.33□□□□□ -0.11
PGBD1-201ENST00000259883 COG5Q9UP83 839 aa14.33□□□□□ -0.11
PGBD1-201ENST00000259883 SMCHD1A6NHR9 2005 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 SEMA3FQ13275 785 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 EPC2Q52LR7 807 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 DENND2CQ68D51 928 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 CCDC105Q8IYK2 499 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 GDAP1Q8TB36 358 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 LMBR1Q8WVP7 490 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 HVCN1Q96D96 273 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 FAM212AQ96EL1 285 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 PWWP2AQ96N64 755 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 MYCBPQ99417 103 aaPredicted RBP14.33□□□□□ -0.12
PGBD1-201ENST00000259883 SLC12A6Q9UHW9 1150 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 ABCA3Q99758 1704 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 DLEC1Q9Y238 1755 aa14.33□□□□□ -0.12
PGBD1-201ENST00000259883 RGS16O15492 202 aaPredicted RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 TGFB1I1O43294 461 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 TRAPPC3O43617 180 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 ATP2B4P23634 1241 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 CLK2P49760 499 aaKnown RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 ACTRT1Q8TDG2 376 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 CCDC127Q96BQ5 260 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 VCPKMTQ9H867 229 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 KCNK9Q9NPC2 374 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 F5H6K3 240 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 SORBS3O60504 671 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 KLRC3Q07444 240 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 GPATCH4Q5T3I0 446 aaKnown RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 MSL1Q68DK7 614 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 CAPN12Q6ZSI9 719 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 FRMD5Q7Z6J6 570 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 FBXO11Q86XK2 927 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 MREGQ8N565 214 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 TYW1Q9NV66 732 aaKnown RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 LAMB1P07942 1786 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 GOLGA6L10A0A0M3HER8 536 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 FTLP02792 175 aaPredicted RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 CREB1P16220 341 aa14.32□□□□□ -0.12
PGBD1-201ENST00000259883 GCFC2P16383 781 aaKnown RBP14.32□□□□□ -0.12
PGBD1-201ENST00000259883 SOX5P35711 763 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms