RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 KNOP1Q1ED39 458 aaKnown RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 GNPTABQ3T906 1256 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 HAUS6Q7Z4H7 955 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 CBWD2Q8IUF1 395 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 THNSL1Q8IYQ7 743 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 POMGNT1Q8WZA1 660 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 SMARCAL1Q9NZC9 954 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 ADAMTS1Q9UHI8 967 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 CYP3A7-CYP3A51PA0A087WV96 503 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 ANKRD63C9JTQ0 380 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 INO80B-WBP1J3KQ70 363 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 PIK3CDO00329 1044 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 ABCB4P21439 1286 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 GFPT1Q06210 699 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 PCNX4Q63HM2 1172 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 C1orf186Q6ZWK4 172 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 HS2ST1Q7LGA3 356 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 RBM46Q8TBY0 533 aaKnown RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 KAT5Q92993 513 aa11.57□□□□□ -0.56
VPS11-208ENST00000621676 PYM1Q9BRP8 204 aaKnown RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 INO80BQ9C086 356 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 GPBP1L1Q9HC44 474 aaPredicted RBP11.57□□□□□ -0.56
VPS11-208ENST00000621676 C5orf42Q9H799 3197 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 CYP3A7P24462 503 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 GSDMDP57764 484 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 PPP2R3AQ06190 1150 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 DHTKD1Q96HY7 919 aaPredicted RBP11.56□□□□□ -0.56
VPS11-208ENST00000621676 GDAP1L1Q96MZ0 367 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 FAM213AQ9BRX8 229 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 ARHGAP39Q9C0H5 1083 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 KMT5AQ9NQR1 393 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 PACSIN2Q9UNF0 486 aaPredicted RBP11.56□□□□□ -0.56
VPS11-208ENST00000621676 QSER1Q2KHR3 1735 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 LAMB1P07942 1786 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 SPDYE5A6NIY4 337 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 IGSF3O75054 1194 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 TBC1D8O95759 1140 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 CIITAP33076 1130 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 ZBTB41Q5SVQ8 909 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
VPS11-208ENST00000621676 AFG1LQ8WV93 481 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 BPIFA3Q9BQP9 254 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 AZI2Q9H6S1 392 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 UBIAD1Q9Y5Z9 338 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 SIPA1L1O43166 1804 aa11.56□□□□□ -0.56
VPS11-208ENST00000621676 XIRP2A4UGR9 3374 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 VTNP04004 478 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 OSBPP22059 807 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 PPATQ06203 517 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 PNMA8AQ86V59 439 aaPredicted RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 CCDC112Q8NEF3 446 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 REPS2Q8NFH8 660 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 NEK11Q8NG66 645 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 TARS2Q9BW92 718 aaKnown RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 LARSQ9P2J5 1176 aaKnown RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 AOC2O75106 756 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 GFPT2O94808 682 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 STAT5BP51692 787 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 ORC1Q13415 861 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 FAM47CQ5HY64 1035 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 MIIPQ5JXC2 388 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 CENPPQ6IPU0 288 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 FAM186BQ8IYM0 893 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 CCDC42Q96M95 316 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 RNPEPQ9H4A4 650 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 ABHD10Q9NUJ1 306 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 MYO7AQ13402 2215 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 MFAP3LO75121 409 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 PSMC5P62195 406 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 BIRC3Q13489 604 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 KCNB1Q14721 858 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 GUF1Q8N442 669 aaKnown RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 CEP120Q8N960 986 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 PLCB1Q9NQ66 1216 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 ZNHIT6Q9NWK9 470 aaKnown RBP11.55□□□□□ -0.56
VPS11-208ENST00000621676 AGTPBP1Q9UPW5 1226 aa11.55□□□□□ -0.56
VPS11-208ENST00000621676 LGALS16A8MUM7 142 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 IGF2BP3O00425 579 aaKnown RBP eCLIP11.54□□□□□ -0.56
VPS11-208ENST00000621676 TGFB1I1O43294 461 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 TRAF1Q13077 416 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 PPM1KQ8N3J5 372 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 RNF149Q8NC42 400 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 CCDC150Q8NCX0 1101 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
VPS11-208ENST00000621676 ZNF215Q9UL58 517 aaPredicted RBP11.54□□□□□ -0.56
VPS11-208ENST00000621676 ZNF500O60304 480 aaPredicted RBP11.54□□□□□ -0.56
VPS11-208ENST00000621676 ZMYND10O75800 440 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms