RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FAXDC2Q96IV6 333 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 TRIM51Q9BSJ1 452 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
GPN1-212ENST00000616939 TFCP2L1Q9NZI6 479 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 PARP2Q9UGN5 583 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 ATP8A1Q9Y2Q0 1164 aa16.91■□□□□ 0.3
GPN1-212ENST00000616939 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 BACH1O14867 736 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 FGGP02679 453 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 ZNF131P52739 623 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 SIK1P57059 783 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 ITPK1Q13572 414 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 E2F5Q15329 346 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 TRPM8Q7Z2W7 1104 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 MDM1Q8TC05 714 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 TRPC6Q9Y210 931 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 MTMR7Q9Y216 660 aa16.9■□□□□ 0.3
GPN1-212ENST00000616939 SNHG28P0DPA3 235 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 HADHBP55084 474 aaKnown RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 PLS1Q14651 629 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 KIAA1755Q5JYT7 1200 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 ZDHHC24Q6UX98 284 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 C15orf41Q9Y2V0 281 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 KIAA0391O15091 583 aaKnown RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 RGS16O15492 202 aaPredicted RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 STAT1P42224 750 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 GALCP54803 685 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 TCEAL1Q15170 157 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 MFSD5Q6N075 450 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 GBP7Q8N8V2 638 aaPredicted RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 U2AF1L4Q8WU68 220 aaKnown RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 RNF25Q96BH1 459 aaPredicted RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 INTS9Q9NV88 658 aaKnown RBP16.89■□□□□ 0.29
GPN1-212ENST00000616939 BTG4Q9NY30 223 aa16.89■□□□□ 0.29
GPN1-212ENST00000616939 USP17L5A8MUK1 530 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 E9PMD0 336 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 KIF3CO14782 793 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 BUB1BO60566 1050 aaPredicted RBP16.88■□□□□ 0.29
GPN1-212ENST00000616939 ATP2C2O75185 946 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 GGPS1O95749 300 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 TNNI2P48788 182 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 SATB1Q01826 763 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 MAPK7Q13164 816 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 NFIL3Q16649 462 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 KNOP1Q1ED39 458 aaKnown RBP16.88■□□□□ 0.29
GPN1-212ENST00000616939 DCAF12L1Q5VU92 463 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 JAMLQ86YT9 394 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 LNX1Q8TBB1 728 aaPredicted RBP16.88■□□□□ 0.29
GPN1-212ENST00000616939 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 MBOAT7Q96N66 472 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 SELENOSQ9BQE4 189 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 SYT11Q9BT88 431 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 VAT1LQ9HCJ6 419 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 TYW1Q9NV66 732 aaKnown RBP16.88■□□□□ 0.29
GPN1-212ENST00000616939 TBC1D7Q9P0N9 293 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 BAIAP2L1Q9UHR4 511 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 PCDHA12Q9UN75 941 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 STK24Q9Y6E0 443 aa16.88■□□□□ 0.29
GPN1-212ENST00000616939 GREB1LQ9C091 1923 aaPredicted RBP16.88■□□□□ 0.29
GPN1-212ENST00000616939 PNMA6FA0A0J9YX94 578 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 SPDYE3A6NKU9 549 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 PHF2O75151 1096 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 SHBGP04278 402 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 ALAS1P13196 640 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 NQO1P15559 274 aaKnown RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 CHRNA3P32297 505 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 PTGIRP43119 386 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 PDE6CP51160 858 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 GALNTL6Q49A17 601 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 MOXD1Q6UVY6 613 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 COA7Q96BR5 231 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 RUNDC3BQ96NL0 473 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 ANKRD27Q96NW4 1050 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 RTFDC1Q9BY42 306 aaPredicted RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 ROPN1BQ9BZX4 212 aaPredicted RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 TRIM6Q9C030 488 aaPredicted RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 NYXQ9GZU5 481 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 AZI2Q9H6S1 392 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 KANSL2Q9H9L4 492 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 ROPN1Q9HAT0 212 aaPredicted RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 GRHL1Q9NZI5 618 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 NOP53Q9NZM5 478 aaKnown RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 MTRF1LQ9UGC7 380 aaKnown RBP16.87■□□□□ 0.29
GPN1-212ENST00000616939 PCYOX1Q9UHG3 505 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 KIAA1024Q9UPX6 916 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 SPATA31A1Q5TZJ5 1347 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms