RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 CAPZA3Q96KX2 299 aa10.91□□□□□ -0.66
GGA3-221ENST00000614198 HSD17B14Q9BPX1 270 aa10.91□□□□□ -0.66
GGA3-221ENST00000614198 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
GGA3-221ENST00000614198 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
GGA3-221ENST00000614198 RAB34Q9BZG1 259 aa10.91□□□□□ -0.66
GGA3-221ENST00000614198 KCNH4Q9UQ05 1017 aa10.91□□□□□ -0.66
GGA3-221ENST00000614198 DOCK3Q8IZD9 2030 aa10.91□□□□□ -0.66
GGA3-221ENST00000614198 ATXN2Q99700 1313 aaKnown RBP10.9□□□□□ -0.66
GGA3-221ENST00000614198 HUNKP57058 714 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 NEDD9Q14511 834 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
GGA3-221ENST00000614198 PCNX4Q63HM2 1172 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 ANKRD40Q6AI12 368 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 LXNQ9BS40 222 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 SLC24A3Q9HC58 644 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 UBIAD1Q9Y5Z9 338 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 NPEPPSP55786 919 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 MAP9Q49MG5 647 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 TTC19Q6DKK2 380 aaPredicted RBP10.9□□□□□ -0.66
GGA3-221ENST00000614198 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 MLKLQ8NB16 471 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 NOA1Q8NC60 698 aaKnown RBP10.9□□□□□ -0.66
GGA3-221ENST00000614198 FAM76AQ8TAV0 307 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 SMCR8Q8TEV9 937 aaPredicted RBP10.9□□□□□ -0.66
GGA3-221ENST00000614198 REEP2Q9BRK0 252 aa10.9□□□□□ -0.66
GGA3-221ENST00000614198 A0A0U1RQJ8 604 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 SOCS7O14512 581 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 MCM3P25205 808 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 RPA1P27694 616 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 FNTAP49354 379 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 ATRIPQ8WXE1 791 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 RIN2Q8WYP3 895 aaPredicted RBP10.9□□□□□ -0.67
GGA3-221ENST00000614198 MIEF2Q96C03 454 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 ZBTB10Q96DT7 871 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 CALR3Q96L12 384 aaKnown RBP10.9□□□□□ -0.67
GGA3-221ENST00000614198 FAM20AQ96MK3 541 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 C7orf25Q9BPX7 421 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 NAA15Q9BXJ9 866 aaKnown RBP10.9□□□□□ -0.67
GGA3-221ENST00000614198 VPS16Q9H269 839 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 CENPHQ9H3R5 247 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 SEMA6BQ9H3T3 888 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 JADE2Q9NQC1 790 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 EXOC1Q9NV70 894 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 MCM8Q9UJA3 840 aa10.9□□□□□ -0.67
GGA3-221ENST00000614198 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 ELF1P32519 619 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 STIM1Q13586 685 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 CYFIP1Q7L576 1253 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 IRF2BP1Q8IU81 584 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 COG1Q8WTW3 980 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 SGSM3Q96HU1 749 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 NAPGQ99747 312 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 GPRC5CQ9NQ84 441 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 AKR1B15C9JRZ8 316 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 RHOBTB3O94955 611 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 KRT18P05783 430 aaKnown RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 SCP2P22307 547 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 COASYQ13057 564 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 PPFIA1Q13136 1202 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 ZC2HC1CQ53FD0 456 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 MOXD1Q6UVY6 613 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 RAD9BQ6WBX8 426 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 ADSSL1Q8N142 457 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 SLC35F6Q8N357 371 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 GIMAP8Q8ND71 665 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 COPS5Q92905 334 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 PANK4Q9NVE7 773 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 USP20Q9Y2K6 914 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 CXCL11O14625 94 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 FSBPO95073 299 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 ARIH2O95376 493 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 ZNF18P17022 549 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 SNAPC2Q13487 334 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 HERC4Q5GLZ8 1057 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 ELOA2Q8IYF1 753 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 PROCA1Q8NCQ7 364 aaPredicted RBP10.89□□□□□ -0.67
GGA3-221ENST00000614198 BCAS4Q8TDM0 211 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 FGD4Q96M96 766 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 TAB2Q9NYJ8 693 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 GUCA1BQ9UMX6 200 aa10.89□□□□□ -0.67
GGA3-221ENST00000614198 CHUKO15111 745 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 EIF3HO15372 352 aaKnown RBP eCLIP10.88□□□□□ -0.674e-7■■■■□ 20.1
GGA3-221ENST00000614198 PAK1Q13153 545 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 GIT2Q14161 759 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 APTXQ7Z2E3 356 aaKnown RBP10.88□□□□□ -0.67
GGA3-221ENST00000614198 MIER3Q7Z3K6 550 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 NSUN6Q8TEA1 469 aaKnown RBP10.88□□□□□ -0.67
GGA3-221ENST00000614198 TEKT3Q9BXF9 490 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 CPA4Q9UI42 421 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 CAPN7Q9Y6W3 813 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 LOC285556D6RIA3 1793 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 MYBP10242 640 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 GGCXP38435 758 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 PPP2R5CQ13362 524 aa10.88□□□□□ -0.67
GGA3-221ENST00000614198 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
GGA3-221ENST00000614198 PREPLQ4J6C6 727 aaPredicted RBP10.88□□□□□ -0.67
GGA3-221ENST00000614198 FBXO16Q8IX29 292 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms