RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
SMG9-210ENST00000600097 KIZQ2M2Z5 673 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 BMP2KLQ5H9B9 411 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 TRIM67Q6ZTA4 783 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 ZNF710Q8N1W2 664 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 COLGALT1Q8NBJ5 622 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 CCDC12Q8WUD4 166 aaPredicted RBP19.5■□□□□ 0.71
SMG9-210ENST00000600097 OSMRQ99650 979 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 FAM217BQ9NTX9 383 aaPredicted RBP19.5■□□□□ 0.71
SMG9-210ENST00000600097 TYW1Q9NV66 732 aaKnown RBP19.5■□□□□ 0.71
SMG9-210ENST00000600097 LZTS1Q9Y250 596 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 PCDHGC5Q9Y5F6 944 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 KIAA1671Q9BY89 1806 aa19.5■□□□□ 0.71
SMG9-210ENST00000600097 HOXA2O43364 376 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 PSAPP07602 524 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 SRGAP2BP0DMP2 458 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 ATF7P17544 494 aaPredicted RBP19.49■□□□□ 0.71
SMG9-210ENST00000600097 CDC27P30260 824 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 DUSP6Q16828 381 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 FAM228AQ86W67 206 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 METTL13Q8N6R0 699 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 ZMYND12Q9H0C1 365 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 C6orf50Q9HD87 102 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 PUF60Q9UHX1 559 aaKnown RBP19.49■□□□□ 0.71
SMG9-210ENST00000600097 PCDHA10Q9Y5I2 948 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 ZNF318Q5VUA4 2279 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 LOXHD1Q8IVV2 1947 aa19.49■□□□□ 0.71
SMG9-210ENST00000600097 TMEM221A6NGB7 291 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 M0R296 226 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 PER2O15055 1255 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 MAGEB2O15479 319 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 GPR32O75388 356 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 VTNP04004 478 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 ERVFC1P60507 584 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
SMG9-210ENST00000600097 PBXIP1Q96AQ6 731 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 FAM167AQ96KS9 214 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 PPP1R16BQ96T49 567 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 TMEM117Q9H0C3 514 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 TECTAO75443 2155 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 TRIOO75962 3097 aa19.48■□□□□ 0.71
SMG9-210ENST00000600097 FSCN2O14926 492 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 FGFR1P11362 822 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 TMOD1P28289 359 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 ZXDAP98168 799 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 FGD1P98174 961 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 PLCB3Q01970 1234 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 DSC3Q14574 896 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 ADCK5Q3MIX3 580 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 TMEM184AQ6ZMB5 413 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 RASEFQ8IZ41 740 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 RASGRP4Q8TDF6 673 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 SUSD6Q92537 303 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 MRPS27Q92552 414 aaKnown RBP19.47■□□□□ 0.71
SMG9-210ENST00000600097 MAP7D2Q96T17 732 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 PRRX2Q99811 253 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 CWH43Q9H720 699 aa19.47■□□□□ 0.71
SMG9-210ENST00000600097 NAP1L2Q9ULW6 460 aaPredicted RBP19.47■□□□□ 0.71
SMG9-210ENST00000600097 ZSCAN20P17040 1043 aaPredicted RBP19.46■□□□□ 0.71
SMG9-210ENST00000600097 GNA11P29992 359 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 ADD1P35611 737 aaKnown RBP19.46■□□□□ 0.71
SMG9-210ENST00000600097 PPM1AP35813 382 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 METAP2P50579 478 aaKnown RBP eCLIP19.46■□□□□ 0.71
SMG9-210ENST00000600097 TRMT1LQ7Z2T5 733 aaKnown RBP19.46■□□□□ 0.71
SMG9-210ENST00000600097 SUGP1Q8IWZ8 645 aaKnown RBP19.46■□□□□ 0.71
SMG9-210ENST00000600097 VN1R2Q8NFZ6 395 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 RPGRIP1Q96KN7 1286 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 NGRNQ9NPE2 291 aaKnown RBP19.46■□□□□ 0.71
SMG9-210ENST00000600097 HCSTQ9UBK5 93 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 GABBR1Q9UBS5 961 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 SAMM50Q9Y512 469 aa19.46■□□□□ 0.71
SMG9-210ENST00000600097 PLXNA4Q9HCM2 1894 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 CIITAP33076 1130 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 NLRP11P59045 1033 aaKnown RBP19.45■□□□□ 0.7
SMG9-210ENST00000600097 PRR16Q569H4 304 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 ABI1Q8IZP0 508 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 LRRC43Q8N309 656 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 ENTPD7Q9NQZ7 604 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 AKT3Q9Y243 479 aa19.45■□□□□ 0.7
SMG9-210ENST00000600097 FNDC1Q4ZHG4 1894 aaPredicted RBP19.45■□□□□ 0.7
SMG9-210ENST00000600097 WDR64B1ANS9 1081 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 EIF4BP23588 611 aaKnown RBP19.44■□□□□ 0.7
SMG9-210ENST00000600097 CLCN3P51790 818 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 RBM10P98175 930 aaKnown RBP19.44■□□□□ 0.7
SMG9-210ENST00000600097 KRT17Q04695 432 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 SIGLEC14Q08ET2 396 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 KCNC3Q14003 757 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 PLPP4Q5VZY2 271 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 EFCAB12Q6NXP0 572 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 KCNT2Q6UVM3 1135 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 ZNF558Q96NG5 402 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 CASD1Q96PB1 797 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 TCF25Q9BQ70 676 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 ADAMTS10Q9H324 1103 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 NRBP2Q9NSY0 501 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 WDFY4Q6ZS81 3184 aa19.44■□□□□ 0.7
SMG9-210ENST00000600097 EVPLQ92817 2033 aa19.43■□□□□ 0.7
SMG9-210ENST00000600097 PRPF3O43395 683 aaKnown RBP19.43■□□□□ 0.7
SMG9-210ENST00000600097 HOXB8P17481 243 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms