RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 PRKCEQ02156 737 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 PPP2R5CQ13362 524 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 TSHZ1Q6ZSZ6 1077 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 SNX21Q969T3 373 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 TTC12Q9H892 705 aaPredicted RBP17.32■□□□□ 0.36
XRCC1-206ENST00000597811 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
XRCC1-206ENST00000597811 SUGCTQ9HAC7 445 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 SEPT9Q9UHD8 586 aaPredicted RBP17.32■□□□□ 0.36
XRCC1-206ENST00000597811 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 KIAA1671Q9BY89 1806 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 MYO7AQ13402 2215 aa17.32■□□□□ 0.36
XRCC1-206ENST00000597811 COL1A2P08123 1366 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 IGSF9BQ9UPX0 1349 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 SMIM35A0A1B0GVV1 85 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 DDX11L8A8MPP1 907 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 ZBTB42B2RXF5 422 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 M0QZ92 97 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 DKC1O60832 514 aaKnown RBP eCLIP17.31■□□□□ 0.36
XRCC1-206ENST00000597811 RPLP2P05387 115 aaKnown RBP17.31■□□□□ 0.36
XRCC1-206ENST00000597811 KLRC1P26715 233 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 NBR1Q14596 966 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 UGCGQ16739 394 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 IER5Q5VY09 327 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 METTL13Q8N6R0 699 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 C17orf80Q9BSJ5 609 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 VAV3Q9UKW4 847 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 TRPV2Q9Y5S1 764 aa17.31■□□□□ 0.36
XRCC1-206ENST00000597811 EML1O00423 815 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 CD52P31358 61 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 PSMC5P62195 406 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 EPHA7Q15375 998 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 TJAP1Q5JTD0 557 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 LINC01599Q8WXQ3 324 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 INTS4Q96HW7 963 aaKnown RBP17.3■□□□□ 0.36
XRCC1-206ENST00000597811 TMEM60Q9H2L4 133 aa17.3■□□□□ 0.36
XRCC1-206ENST00000597811 ENPP3O14638 875 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 ZNF862O60290 1169 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 P4HBP07237 508 aaKnown RBP17.29■□□□□ 0.36
XRCC1-206ENST00000597811 TECP42680 631 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 QARSP47897 775 aaKnown RBP17.29■□□□□ 0.36
XRCC1-206ENST00000597811 CYP4A11Q02928 519 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 ORC2Q13416 577 aaPredicted RBP17.29■□□□□ 0.36
XRCC1-206ENST00000597811 TMEM266Q2M3C6 531 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 MTERF2Q49AM1 385 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 RILPL1Q5EBL4 403 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 XKR3Q5GH77 459 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 TPH2Q8IWU9 490 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 SPRYD3Q8NCJ5 442 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
XRCC1-206ENST00000597811 DYDC2Q96IM9 177 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 CELF4Q9BZC1 486 aaKnown RBP17.29■□□□□ 0.36
XRCC1-206ENST00000597811 GINS2Q9Y248 185 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 SQORQ9Y6N5 450 aa17.29■□□□□ 0.36
XRCC1-206ENST00000597811 KDM3AQ9Y4C1 1321 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 C22orf31O95567 290 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 CTTNQ14247 550 aaKnown RBP17.28■□□□□ 0.36
XRCC1-206ENST00000597811 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
XRCC1-206ENST00000597811 B3GNT9Q6UX72 402 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 FERMT3Q86UX7 667 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 KIAA0319LQ8IZA0 1049 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 NME8Q8N427 588 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
XRCC1-206ENST00000597811 MTMR9Q96QG7 549 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 SH2D3AQ9BRG2 576 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 PADI3Q9ULW8 664 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
XRCC1-206ENST00000597811 FNDC1Q4ZHG4 1894 aaPredicted RBP17.27■□□□□ 0.36
XRCC1-206ENST00000597811 POTEMA6NI47 508 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 MAGEB2O15479 319 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 TMOD1P28289 359 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 TFF2Q03403 129 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 PAK2Q13177 524 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 RTN4RL1Q86UN2 441 aaPredicted RBP17.27■□□□□ 0.36
XRCC1-206ENST00000597811 FBXO22Q8NEZ5 403 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
XRCC1-206ENST00000597811 ASB2Q96Q27 587 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 PPP1R16BQ96T49 567 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 EIF2AK1Q9BQI3 630 aaKnown RBP17.27■□□□□ 0.36
XRCC1-206ENST00000597811 LXNQ9BS40 222 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 TSPYL2Q9H2G4 693 aaPredicted RBP17.27■□□□□ 0.36
XRCC1-206ENST00000597811 CDHR5Q9HBB8 845 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
XRCC1-206ENST00000597811 LMCD1Q9NZU5 365 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 AKT3Q9Y243 479 aa17.27■□□□□ 0.36
XRCC1-206ENST00000597811 TMEM150BA6NC51 233 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 SYT1P21579 422 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
XRCC1-206ENST00000597811 MRPS5P82675 430 aaKnown RBP17.26■□□□□ 0.35
XRCC1-206ENST00000597811 PTGDRQ13258 359 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
XRCC1-206ENST00000597811 OTUD6AQ7L8S5 288 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms