RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SP3Q02447 781 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 MTERF2Q49AM1 385 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 PPTC7Q8NI37 304 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 AFG1LQ8WV93 481 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 GPRC5CQ9NQ84 441 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 PDLIM7Q9NR12 457 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 NRBP2Q9NSY0 501 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 GABRQQ9UN88 632 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 MYH11P35749 1972 aa16.78■□□□□ 0.28
VRK3-207ENST00000594092 DGAT1O75907 488 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 KIF20AO95235 890 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 XRCC5P13010 732 aaKnown RBP16.77■□□□□ 0.28
VRK3-207ENST00000594092 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
VRK3-207ENST00000594092 TNFAIP2Q03169 654 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 NELFCDQ8IXH7 590 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 FAM167AQ96KS9 214 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 CEP89Q96ST8 783 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 XPO4Q9C0E2 1151 aaKnown RBP16.77■□□□□ 0.28
VRK3-207ENST00000594092 SMARCAD1Q9H4L7 1026 aa16.77■□□□□ 0.28
VRK3-207ENST00000594092 GCNT3O95395 438 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 PLS3P13797 630 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 FLT3LGP49771 235 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 UBASH3AP57075 661 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 TARBP2Q15633 366 aaKnown RBP16.77■□□□□ 0.27
VRK3-207ENST00000594092 BMT2Q1RMZ1 405 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 FAM102BQ5T8I3 360 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 FAM178BQ8IXR5 827 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 OR6J1Q8NGC5 347 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 SRRTQ9BXP5 876 aaKnown RBP16.77■□□□□ 0.27
VRK3-207ENST00000594092 KCTD10Q9H3F6 313 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 XPNPEP1Q9NQW7 623 aa16.77■□□□□ 0.27
VRK3-207ENST00000594092 LARSQ9P2J5 1176 aaKnown RBP16.77■□□□□ 0.27
VRK3-207ENST00000594092 PRPF6O94906 941 aaKnown RBP16.76■□□□□ 0.27
VRK3-207ENST00000594092 MARK3P27448 753 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 HOXD13P35453 343 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 PRKCZQ05513 592 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 LRRC63Q05C16 580 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 KIF22Q14807 665 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 PLCB4Q15147 1175 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 ZCWPW2Q504Y3 356 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 FOXR2Q6PJQ5 311 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 ZNF720Q7Z2F6 126 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 IRF2BP1Q8IU81 584 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 CSGALNACT2Q8N6G5 542 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 MCPH1Q8NEM0 835 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 ZNF507Q8TCN5 953 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
VRK3-207ENST00000594092 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 DHX33Q9H6R0 707 aaKnown RBP16.76■□□□□ 0.27
VRK3-207ENST00000594092 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
VRK3-207ENST00000594092 EIF3DO15371 548 aaKnown RBP eCLIP16.75■□□□□ 0.27
VRK3-207ENST00000594092 LGALS2P05162 132 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 SLC26A2P50443 739 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 SOX10P56693 466 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 ZSCAN30Q86W11 494 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 ATP8B4Q8TF62 1192 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 KIFAP3Q92845 792 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 TSG101Q99816 390 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 GNEQ9Y223 722 aaKnown RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 PCNTO95613 3336 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 ESPNB1AK53 854 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 PPFIA4O75335 1185 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 MAPTP10636 758 aaKnown RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 HOXD8P13378 290 aaPredicted RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 POLGP54098 1239 aaPredicted RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 EMC2Q15006 297 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 KNOP1Q1ED39 458 aaKnown RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 ZC2HC1CQ53FD0 456 aaPredicted RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 APTXQ7Z2E3 356 aaKnown RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 NAP1L5Q96NT1 182 aaPredicted RBP16.75■□□□□ 0.27
VRK3-207ENST00000594092 STRA6Q9BX79 667 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 THSD7BQ9C0I4 1608 aa16.75■□□□□ 0.27
VRK3-207ENST00000594092 PPP1R37O75864 691 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 RFC5P40937 340 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 SPAG1Q07617 926 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 KCNA1Q09470 495 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 TRIB2Q92519 343 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 EEF2KMTQ96G04 330 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 PPME1Q9Y570 386 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 PCDHB13Q9Y5F0 798 aa16.74■□□□□ 0.27
VRK3-207ENST00000594092 UBE4BO95155 1302 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 KCNJ18B7U540 433 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 K7ENM7 598 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
VRK3-207ENST00000594092 MMP3P08254 477 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
VRK3-207ENST00000594092 PEX3P56589 373 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 KCNJ12Q14500 433 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 STXBP4Q6ZWJ1 553 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 CCDC186Q7Z3E2 898 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 TRPV1Q8NER1 839 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 SLC7A3Q8WY07 619 aa16.73■□□□□ 0.27
VRK3-207ENST00000594092 BSNDQ8WZ55 320 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms