RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 FRMPD1Q5SYB0 1578 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 ORC4O43929 436 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 AKR1B1P15121 316 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 SF3A3Q12874 501 aaKnown RBP eCLIP14.33□□□□□ -0.124e-6■■■■■ 34.3
SMARCA4-216ENST00000591545 RASIP1Q5U651 963 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 EMBQ6PCB8 327 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 C1orf228Q6PIY5 440 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 USP17L6PQ6QN14 398 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 SARM1Q6SZW1 724 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 LBHD1Q9BQE6 289 aaPredicted RBP14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 TRIM4Q9C037 500 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 PNPLA7Q6ZV29 1317 aa14.33□□□□□ -0.12
SMARCA4-216ENST00000591545 NTSR2O95665 410 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 PLCG1P19174 1290 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 COG7P83436 770 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 PPP2R3CQ969Q6 453 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 LRGUKQ96M69 825 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 PRDM5Q9NQX1 630 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 SRPRBQ9Y5M8 271 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 DCCP43146 1447 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 CUL1Q13616 776 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 RABL6Q3YEC7 729 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 ZNF449Q6P9G9 518 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 GCOM2Q9BZD3 368 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 CCL15-CCL14A0A0B4J2E2 113 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 H7C0C1 242 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 STK25O00506 426 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 GPC4O75487 556 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 SERPING1P05155 500 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 ATP5OP48047 213 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 MESDQ14696 234 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 CCL15Q16663 113 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 ENAHQ8N8S7 591 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 DRC3Q9H069 523 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 TSPYL2Q9H2G4 693 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 CLDN3O15551 220 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 SEC31AO94979 1220 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 SERPINB6P35237 376 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 DDIT3P35638 169 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 KPNA2P52292 529 aaKnown RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 PPARDQ03181 441 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 KCTD16Q68DU8 428 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 ANKRD13CQ8N6S4 541 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 EPS15L1Q9UBC2 864 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 CPS1P31327 1500 aa14.32□□□□□ -0.12
SMARCA4-216ENST00000591545 NEDD4P46934 1319 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 GSTA1P08263 222 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 GSTA2P09210 222 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 SRGAP2BP0DMP2 458 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 GLE1Q53GS7 698 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 MRPL47Q9HD33 250 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 FAF1Q9UNN5 650 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 DIP2AQ14689 1571 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 CIITAP33076 1130 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 RESTQ13127 1097 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 ORC2Q13416 577 aaPredicted RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 SKIV2LQ15477 1246 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 C12orf60Q5U649 245 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 MB21D1Q8N884 522 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 PARD6BQ9BYG5 372 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 MID2Q9UJV3 735 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 DIS3Q9Y2L1 958 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 P4HBP07237 508 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 MAPK4P31152 587 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 SGO2Q562F6 1265 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 ZNF667Q5HYK9 610 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 ZNF653Q96CK0 615 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 CALR3Q96L12 384 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 GSG1L2A8MUP6 293 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 ENC1O14682 589 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 MMEL1Q495T6 779 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 C9orf131Q5VYM1 1079 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 JADE1Q6IE81 842 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 UHMK1Q8TAS1 419 aaKnown RBP14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 MTRQ99707 1265 aa14.31□□□□□ -0.12
SMARCA4-216ENST00000591545 NDUFA10O95299 355 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 PDE1BQ01064 536 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 ADAT2Q7Z6V5 191 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 OR6B3Q8NGW1 331 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 KLHL29Q96CT2 875 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 EFHD1Q9BUP0 239 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 SPATS2LQ9NUQ6 558 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 STK36Q9NRP7 1315 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 DPYSL4O14531 572 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 TXNP10599 105 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 ARL4AP40617 200 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 QARSP47897 775 aaKnown RBP14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 STX1BP61266 288 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 TSPY1Q01534 308 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 LRRC63Q05C16 580 aa14.3□□□□□ -0.12
SMARCA4-216ENST00000591545 ADGRF4Q8IZF3 695 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms