RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 CHMP4BP1P59074 171 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 EMC2Q15006 297 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 POSTNQ15063 836 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 TAF2Q6P1X5 1199 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 C1orf186Q6ZWK4 172 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 SH3RF1Q7Z6J0 888 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 LRRC15Q8TF66 581 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 LMBR1Q8WVP7 490 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 KIFAP3Q92845 792 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 CEP89Q96ST8 783 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 GTPBP4Q9BZE4 634 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 TRIM9Q9C026 710 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 CLSTN2Q9H4D0 955 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 C17orf75Q9HAS0 396 aa18.84■□□□□ 0.61
SCAMP4-211ENST00000588907 MBLAC1A4D2B0 266 aaPredicted RBP18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 USO1O60763 962 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 TBCAO75347 108 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 CDC42EP1Q00587 391 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 DHX8Q14562 1220 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 FAM47CQ5HY64 1035 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 CCDC183Q5T5S1 534 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 C1orf53Q5VUE5 145 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 SLC43A3Q8NBI5 491 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 DDX12PQ92771 950 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 HDAC6Q9UBN7 1215 aa18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 KIAA0100Q14667 2235 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-211ENST00000588907 IGKV6-21A0A0C4DH24 114 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 PVALEFA0A1B0GWK0 134 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 TMEM150BA6NC51 233 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 MYMKA6NI61 221 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 ARVCFO00192 962 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 C22orf31O95567 290 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 COL6A1P12109 1028 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 SCP2P22307 547 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 AFMP43652 599 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 RTP1P59025 263 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 IGBP1P78318 339 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 IER5Q5VY09 327 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 MTHFD1LQ6UB35 978 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 NECAB2Q7Z6G3 386 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 CCDC65Q8IXS2 484 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 SLC17A8Q8NDX2 589 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 RUSC1Q9BVN2 902 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 C11orf49Q9H6J7 331 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 PDLIM7Q9NR12 457 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 SETD4Q9NVD3 440 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 RMND1Q9NWS8 449 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 SEL1LQ9UBV2 794 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 PCDHA2Q9Y5H9 948 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 COL4A3BPQ9Y5P4 624 aa18.82■□□□□ 0.6
SCAMP4-211ENST00000588907 A0A087WWV3 80 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 SMIM35A0A1B0GVV1 85 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 TRAK2O60296 914 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 LETM1O95202 739 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 GAP43P17677 238 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 KLRC1P26715 233 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 ABCD1P33897 745 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 ASIC1P78348 528 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 ADAM17P78536 824 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 MXD4Q14582 209 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 MAP7D2Q96T17 732 aa18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 SENP6Q9GZR1 1112 aaPredicted RBP18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 LARSQ9P2J5 1176 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-211ENST00000588907 GRIN2DO15399 1336 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 ASAP2O43150 1006 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 CAND2O75155 1236 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 FAM13AO94988 1023 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 MDM2Q00987 491 aaPredicted RBP18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 DPYDQ12882 1025 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 SNX17Q15036 470 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 PPP2R5AQ15172 486 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 ARSHQ5FYA8 562 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 MARCH8Q5T0T0 291 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 FAM102BQ5T8I3 360 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 UNC13DQ70J99 1090 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 RSPH3Q86UC2 560 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 NME8Q8N427 588 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 METTL13Q8N6R0 699 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 PSPC1Q8WXF1 523 aaKnown RBP18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 SMARCE1Q969G3 411 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 IFT74Q96LB3 600 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 GSDMAQ96QA5 445 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 REEP2Q9BRK0 252 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 PARVGQ9HBI0 331 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 NOD1Q9Y239 953 aa18.8■□□□□ 0.6
SCAMP4-211ENST00000588907 PHLPP2Q6ZVD8 1323 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 FRMD3A2A2Y4 597 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 TLR3O15455 904 aaKnown RBP18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 HIP1RO75146 1068 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 ZNF131P52739 623 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 DMP1Q13316 513 aaPredicted RBP18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 GIT2Q14161 759 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 EFCAB12Q6NXP0 572 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 DYMQ7RTS9 669 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 RPAINQ86UA6 219 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 TRAPPC12Q8WVT3 735 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 DNAJC19Q96DA6 116 aa18.79■□□□□ 0.6
SCAMP4-211ENST00000588907 SH2D3AQ9BRG2 576 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms