RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 GUF1Q8N442 669 aaKnown RBP24.64■■□□□ 1.54
ATG4D-209ENST00000588857 TRIB2Q92519 343 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 DRC1Q96MC2 740 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 SEL1LQ9UBV2 794 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 PCDHA2Q9Y5H9 948 aa24.64■■□□□ 1.54
ATG4D-209ENST00000588857 KIF20AO95235 890 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 RGS19P49795 217 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 ZNF131P52739 623 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 SLC9C1Q4G0N8 1177 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 SPATA1Q5VX52 437 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 TRIM50Q86XT4 487 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 MYOCDQ8IZQ8 938 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 BBXQ8WY36 941 aaPredicted RBP24.63■■□□□ 1.53
ATG4D-209ENST00000588857 MRPL44Q9H9J2 332 aaKnown RBP24.63■■□□□ 1.53
ATG4D-209ENST00000588857 OLFML3Q9NRN5 406 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 NFE2L3Q9Y4A8 694 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 DYNC1LI2O43237 492 aaPredicted RBP24.63■■□□□ 1.53
ATG4D-209ENST00000588857 ADCY6O43306 1168 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 MARK3P27448 753 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 SOX10P56693 466 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 LRRC41Q15345 812 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 TPD52L1Q16890 204 aaPredicted RBP24.63■■□□□ 1.53
ATG4D-209ENST00000588857 MCPH1Q8NEM0 835 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 ERAP1Q9NZ08 941 aa24.63■■□□□ 1.53
ATG4D-209ENST00000588857 GNEQ9Y223 722 aaKnown RBP24.63■■□□□ 1.53
ATG4D-209ENST00000588857 BICDL2A1A5D9 508 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 LGALS2P05162 132 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 MAPK7Q13164 816 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 ODR4Q5SWX8 454 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 FAM102BQ5T8I3 360 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 RAET1EQ8TD07 263 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 ATP8B4Q8TF62 1192 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 P2RX5Q93086 422 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 MED15Q96RN5 788 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 ATP6V0A4Q9HBG4 840 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 FANCLQ9NW38 375 aa24.62■■□□□ 1.53
ATG4D-209ENST00000588857 LARSQ9P2J5 1176 aaKnown RBP24.62■■□□□ 1.53
ATG4D-209ENST00000588857 MMP3P08254 477 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 AKR1A1P14550 325 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 CCNE1P24864 410 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 POLGP54098 1239 aaPredicted RBP24.61■■□□□ 1.53
ATG4D-209ENST00000588857 DGKDQ16760 1214 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 TLK2Q86UE8 772 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 FAM178BQ8IXR5 827 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 DAW1Q8N136 415 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 GLIS3Q8NEA6 775 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 AP5M1Q9H0R1 490 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 Q9Y3F1 56 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 PPME1Q9Y570 386 aa24.61■■□□□ 1.53
ATG4D-209ENST00000588857 RFC5P40937 340 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 PLCB4Q15147 1175 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 SLC7A3Q8WY07 619 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 KIFAP3Q92845 792 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 ZNF333Q96JL9 665 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 FGFBP2Q9BYJ0 223 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 ZNF215Q9UL58 517 aaPredicted RBP24.6■■□□□ 1.53
ATG4D-209ENST00000588857 TRPC6Q9Y210 931 aa24.6■■□□□ 1.53
ATG4D-209ENST00000588857 GCNT3O95395 438 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 PLS3P13797 630 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 TARBP2Q15633 366 aaKnown RBP24.59■■□□□ 1.53
ATG4D-209ENST00000588857 BRDTQ58F21 947 aaPredicted RBP24.59■■□□□ 1.53
ATG4D-209ENST00000588857 STXBP4Q6ZWJ1 553 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 SH3TC2Q8TF17 1288 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 PDLIM7Q9NR12 457 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 HOXD8P13378 290 aaPredicted RBP24.59■■□□□ 1.53
ATG4D-209ENST00000588857 CYBAP13498 195 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 EMC2Q15006 297 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 EXOC8Q8IYI6 725 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 SCFD1Q8WVM8 642 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 GPRC5CQ9NQ84 441 aa24.59■■□□□ 1.53
ATG4D-209ENST00000588857 KAT6AQ92794 2004 aa24.58■■□□□ 1.53
ATG4D-209ENST00000588857 TRIM49BA6NDI0 452 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 A6NJR5 290 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 HBP1O60381 514 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 ZNF286BP0CG31 522 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 CPT1AP50416 773 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 CASP5P51878 434 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 CENPPQ6IPU0 288 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 EPM2AIP1Q7L775 607 aaPredicted RBP24.58■■□□□ 1.52
ATG4D-209ENST00000588857 TRPV1Q8NER1 839 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 LENG1Q96BZ8 264 aaPredicted RBP24.58■■□□□ 1.52
ATG4D-209ENST00000588857 HSD3B7Q9H2F3 369 aa24.58■■□□□ 1.52
ATG4D-209ENST00000588857 DHX33Q9H6R0 707 aaKnown RBP24.58■■□□□ 1.52
ATG4D-209ENST00000588857 CENPFP49454 3210 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 ADCY3O60266 1144 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 MYBP10242 640 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 ELNP15502 786 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 CDK11BP21127 795 aaKnown RBP24.57■■□□□ 1.52
ATG4D-209ENST00000588857 CNGA1P29973 690 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 NMT1P30419 496 aaKnown RBP24.57■■□□□ 1.52
ATG4D-209ENST00000588857 GRK4P32298 578 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 PMS1P54277 932 aaKnown RBP24.57■■□□□ 1.52
ATG4D-209ENST00000588857 ANKRD40Q6AI12 368 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 TTI2Q6NXR4 508 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 TSG101Q99816 390 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 C16orf70Q9BSU1 422 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 SEMA6BQ9H3T3 888 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 C17orf75Q9HAS0 396 aa24.57■■□□□ 1.52
ATG4D-209ENST00000588857 SAMSN1Q9NSI8 373 aaKnown RBP24.57■■□□□ 1.52
ATG4D-209ENST00000588857 H3BRB1 525 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms