RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 NAP1L4Q99733 375 aaKnown RBP20.1■□□□□ 0.81
ERBB2-221ENST00000584888 FTHL17Q9BXU8 183 aa20.1■□□□□ 0.81
ERBB2-221ENST00000584888 BRMS1Q9HCU9 246 aa20.1■□□□□ 0.81
ERBB2-221ENST00000584888 KDM3AQ9Y4C1 1321 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 C5orf67F2Z3F1 127 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 TBX3O15119 743 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 STBD1O95210 358 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 RB1P06400 928 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 PAK2Q13177 524 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 BTG3Q14201 252 aaPredicted RBP20.09■□□□□ 0.81
ERBB2-221ENST00000584888 UGCGQ16739 394 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 LEXMQ3ZCV2 418 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 KIAA0319LQ8IZA0 1049 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 CRIPAKQ8N1N5 446 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 CLP1Q92989 425 aaKnown RBP20.09■□□□□ 0.81
ERBB2-221ENST00000584888 VAV3Q9UKW4 847 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 SAMM50Q9Y512 469 aa20.09■□□□□ 0.81
ERBB2-221ENST00000584888 CCNT1O60563 726 aaKnown RBP20.08■□□□□ 0.81
ERBB2-221ENST00000584888 C22orf31O95567 290 aa20.08■□□□□ 0.81
ERBB2-221ENST00000584888 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
ERBB2-221ENST00000584888 PPP2R5CQ13362 524 aa20.08■□□□□ 0.81
ERBB2-221ENST00000584888 TCEAL5Q5H9L2 206 aa20.08■□□□□ 0.81
ERBB2-221ENST00000584888 MIER3Q7Z3K6 550 aa20.08■□□□□ 0.81
ERBB2-221ENST00000584888 FAM167AQ96KS9 214 aa20.08■□□□□ 0.81
ERBB2-221ENST00000584888 C11orf84Q9BUA3 381 aaPredicted RBP20.08■□□□□ 0.81
ERBB2-221ENST00000584888 UPF2Q9HAU5 1272 aaKnown RBP20.08■□□□□ 0.81
ERBB2-221ENST00000584888 RWDD3Q9Y3V2 267 aa20.08■□□□□ 0.81
ERBB2-221ENST00000584888 BDP1A6H8Y1 2624 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 EML1O00423 815 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 WNT7AO00755 349 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 GRM6O15303 877 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 CHMP2AO43633 222 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 CD2BP2O95400 341 aaKnown RBP20.07■□□□□ 0.8
ERBB2-221ENST00000584888 FOSBP53539 338 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 TRIM29Q14134 588 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 TMEM266Q2M3C6 531 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 NPAS4Q8IUM7 802 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 CKAP2LQ8IYA6 745 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 LINC01465Q8N7H1 131 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 FBXO18Q8NFZ0 1043 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.07■□□□□ 0.8
ERBB2-221ENST00000584888 TMX1Q9H3N1 280 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 NSUN3Q9H649 340 aaKnown RBP20.07■□□□□ 0.8
ERBB2-221ENST00000584888 CDHR5Q9HBB8 845 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 GINS2Q9Y248 185 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 MYO7AQ13402 2215 aa20.07■□□□□ 0.8
ERBB2-221ENST00000584888 ST18O60284 1047 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 OATP04181 439 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 COL9A1P20849 921 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 PRKCEQ02156 737 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
ERBB2-221ENST00000584888 TARBP2Q15633 366 aaKnown RBP20.06■□□□□ 0.8
ERBB2-221ENST00000584888 TRMT1LQ7Z2T5 733 aaKnown RBP20.06■□□□□ 0.8
ERBB2-221ENST00000584888 NLRC5Q86WI3 1866 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 POTEDQ86YR6 584 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 CMTR2Q8IYT2 770 aaKnown RBP20.06■□□□□ 0.8
ERBB2-221ENST00000584888 C8orf76Q96K31 380 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 CEP89Q96ST8 783 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 ERVK-5Q9HDB9 667 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 NRBP2Q9NSY0 501 aa20.06■□□□□ 0.8
ERBB2-221ENST00000584888 RALGAPA2Q2PPJ7 1873 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 STAG3L1P0CL83 205 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 GUCY1B3Q02153 619 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 SPIRE1Q08AE8 756 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 NEK9Q8TD19 979 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 TMEM40Q8WWA1 233 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 NIFKQ9BYG3 293 aaKnown RBP20.05■□□□□ 0.8
ERBB2-221ENST00000584888 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 LMAN2LQ9H0V9 348 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 EPHX3Q9H6B9 360 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 CEP131Q9UPN4 1083 aa20.05■□□□□ 0.8
ERBB2-221ENST00000584888 NOC2LQ9Y3T9 749 aaKnown RBP20.05■□□□□ 0.8
ERBB2-221ENST00000584888 MRPL42Q9Y6G3 142 aaKnown RBP20.05■□□□□ 0.8
ERBB2-221ENST00000584888 MAGEB2O15479 319 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 RPS6KA5O75582 802 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 COL19A1Q14993 1142 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 PTCRAQ6ISU1 281 aaPredicted RBP20.04■□□□□ 0.8
ERBB2-221ENST00000584888 PABPC5Q96DU9 382 aaKnown RBP20.04■□□□□ 0.8
ERBB2-221ENST00000584888 TMX3Q96JJ7 454 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 PLVAPQ9BX97 442 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 C1QTNF1Q9BXJ1 281 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 FOXP1Q9H334 677 aaPredicted RBP20.04■□□□□ 0.8
ERBB2-221ENST00000584888 CD320Q9NPF0 282 aa20.04■□□□□ 0.8
ERBB2-221ENST00000584888 GRXCR2A6NFK2 248 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 H3BQ06 376 aaPredicted RBP20.03■□□□□ 0.8
ERBB2-221ENST00000584888 IL9P15248 144 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 SAFBQ15424 915 aaKnown RBP eCLIP20.03■□□□□ 0.8
ERBB2-221ENST00000584888 PAN2Q504Q3 1202 aaKnown RBP20.03■□□□□ 0.8
ERBB2-221ENST00000584888 XKR3Q5GH77 459 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 FAM43BQ6ZT52 329 aaPredicted RBP20.03■□□□□ 0.8
ERBB2-221ENST00000584888 EP400NLQ6ZTU2 488 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 SLFN12Q8IYM2 578 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 METTL13Q8N6R0 699 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 MTMR9Q96QG7 549 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 ALG13Q9NP73 1137 aaKnown RBP20.03■□□□□ 0.8
ERBB2-221ENST00000584888 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 ST3GAL5Q9UNP4 418 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 PLAGL2Q9UPG8 496 aa20.03■□□□□ 0.8
ERBB2-221ENST00000584888 MGEA5O60502 916 aa20.02■□□□□ 0.8
ERBB2-221ENST00000584888 GPR32O75388 356 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms