RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 CTTNQ14247 550 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SCARA5Q6ZMJ2 495 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 CPSF3Q9UKF6 684 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 GOLGA8IPA6NC78 632 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 GOLGA8JA6NMD2 632 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 PLEKHA8P1O95397 391 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 ARL13BQ3SXY8 428 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 TTLL11Q8NHH1 800 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 NOC2LQ9Y3T9 749 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 HNRNPCL2B2RXH8 293 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 INO80B-WBP1J3KQ70 363 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 HNRNPCL1O60812 293 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 PRCPP42785 496 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM98CQ17RN3 349 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 NCLNQ969V3 563 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM161BQ96MY7 647 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 INO80BQ9C086 356 aaPredicted RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 CNOT8Q9UFF9 292 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 BMP3P12645 472 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 LRRC4Q9HBW1 653 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 SUN2Q9UH99 717 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 ADGRG1Q9Y653 693 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 WDR19Q8NEZ3 1342 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 SLFN12LQ6IEE8 588 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 CAPRIN2Q6IMN6 1127 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 USP17L2Q6R6M4 530 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 RASSF3Q86WH2 238 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 SPICE1Q8N0Z3 855 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 SH3GL3Q99963 347 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 PDLIM2Q96JY6 352 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 MSTO1Q9BUK6 570 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 MXD3Q9BW11 206 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 SLITRK6Q9H5Y7 841 aa15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 PIH1D3Q9NQM4 214 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-217ENST00000581241 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 ZBTB24O43167 697 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 HDAC4P56524 1084 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 TMEM259Q4ZIN3 620 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 EXT2Q93063 718 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 CDHR1Q96JP9 859 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 ING2Q9H160 280 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 RPF1Q9H9Y2 349 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 KIF9Q9HAQ2 790 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 NT5C2P49902 561 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 RSRC2Q7L4I2 434 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 TEKT2Q9UIF3 430 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 RANBP1P43487 201 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 CYP26B1Q9NR63 512 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 HDAC6Q9UBN7 1215 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 XPAP23025 273 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 HSPA9P38646 679 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 NUP85Q9BW27 656 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 WNT8AQ9H1J5 351 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 EPN3Q9H201 632 aa15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 WARS2Q9UGM6 360 aaKnown RBP15.53■□□□□ 0.08
CSNK1D-217ENST00000581241 KIF1BO60333 1816 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 PMLP29590 882 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 PTPN12Q05209 780 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 MTERF2Q49AM1 385 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ARHGEF9O43307 516 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ATP1A1P05023 1023 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 PAPOLAP51003 745 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 CDO1Q16878 200 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ZC4H2Q9NQZ6 224 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ASNSD1Q9NWL6 643 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 STRIP2Q9ULQ0 834 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 LDHAP00338 332 aaKnown RBP15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 MYBL1P10243 752 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 IGSF1Q8N6C5 1336 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ARMC2Q8NEN0 867 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ZNF564Q8TBZ8 553 aaPredicted RBP15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 ETNK1Q9HBU6 452 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 GTSE1Q9NYZ3 720 aa15.52■□□□□ 0.08
CSNK1D-217ENST00000581241 NEDD4P46934 1319 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 WDR64B1ANS9 1081 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 PCYT1AP49585 367 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 EFTUD2Q15029 972 aaKnown RBP eCLIP15.52■□□□□ 0.071e-6■■□□□ 13.7
CSNK1D-217ENST00000581241 C7orf31Q8N865 590 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 DDX17Q92841 729 aaKnown RBP15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 OLA1Q9NTK5 396 aaKnown RBP15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 CDK12Q9NYV4 1490 aaPredicted RBP15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 NR3C1P04150 777 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 BRAFP15056 766 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 COASYQ13057 564 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 TBC1D9BQ66K14 1250 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 DTNBP1Q96EV8 351 aa15.52■□□□□ 0.07
CSNK1D-217ENST00000581241 GOLGA8MH3BSY2 632 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 CALB1P05937 261 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 USP17L8P0C7I0 530 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 DHX34Q14147 1143 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 HEMGNQ9BXL5 484 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 TRAF3IP3Q9Y228 551 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 E2F6O75461 281 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 PPARGP37231 505 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 FLOT2Q14254 428 aa15.51■□□□□ 0.07
CSNK1D-217ENST00000581241 SRLQ86TD4 932 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms