RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MCTP2Q6DN12 878 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 MIS18BP1Q6P0N0 1132 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 KCNT2Q6UVM3 1135 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 NIPA1Q7RTP0 329 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 CMTR1Q8N1G2 835 aaKnown RBP15.2■□□□□ 0.02
COPS3-214ENST00000577246 TMEM40Q8WWA1 233 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 MAP4K1Q92918 833 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 APOL5Q9BWW9 433 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 ADAM7Q9H2U9 754 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 ZNF302Q9NR11 478 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 SPG21Q9NZD8 308 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 TCEAL9Q9UHQ7 104 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 CEP131Q9UPN4 1083 aa15.2■□□□□ 0.02
COPS3-214ENST00000577246 CARNS1A5YM72 827 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 HIDE1A8MVS5 230 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 hCG_1984214I3L0E3 225 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 ARP10275 920 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
COPS3-214ENST00000577246 SP100P23497 879 aaPredicted RBP15.19■□□□□ 0.02
COPS3-214ENST00000577246 NBL1P41271 181 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 NAPAP54920 295 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 KIZQ2M2Z5 673 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 ABHD15Q6UXT9 468 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 TMTC3Q6ZXV5 915 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 FAM228AQ86W67 206 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 ZNF713Q8N859 430 aaPredicted RBP15.19■□□□□ 0.02
COPS3-214ENST00000577246 FANCBQ8NB91 859 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 TMEM87AQ8NBN3 555 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 CYP2W1Q8TAV3 490 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 RSPH1Q8WYR4 309 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 OSMRQ99650 979 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 MFSD1Q9H3U5 465 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 RIC8AQ9NPQ8 531 aa15.19■□□□□ 0.02
COPS3-214ENST00000577246 ZDBF2Q9HCK1 2354 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 hCG_1642624A0A1W2PR95 340 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 MEIS1O00470 390 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 PDGFBP01127 241 aaPredicted RBP15.18■□□□□ 0.02
COPS3-214ENST00000577246 RXRAP19793 462 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 TMOD1P28289 359 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 ADCY7P51828 1080 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 PLCD3Q8N3E9 789 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 METTL13Q8N6R0 699 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 MRPL43Q8N983 215 aaKnown RBP15.18■□□□□ 0.02
COPS3-214ENST00000577246 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
COPS3-214ENST00000577246 BBXQ8WY36 941 aaPredicted RBP15.18■□□□□ 0.02
COPS3-214ENST00000577246 CASD1Q96PB1 797 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 MAP7D2Q96T17 732 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 MRPL9Q9BYD2 267 aaKnown RBP15.18■□□□□ 0.02
COPS3-214ENST00000577246 ANO3Q9BYT9 981 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 DZANK1Q9NVP4 752 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 HCSTQ9UBK5 93 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 RBM8AQ9Y5S9 174 aaKnown RBP15.18■□□□□ 0.02
COPS3-214ENST00000577246 HCFC2Q9Y5Z7 792 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
COPS3-214ENST00000577246 PRR23AA6NEV1 266 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 C2CD4DB7Z1M9 353 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 DDX39AO00148 427 aaKnown RBP15.17■□□□□ 0.02
COPS3-214ENST00000577246 MAGEB2O15479 319 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 C22orf31O95567 290 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 BRD1O95696 1058 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 CCNE2O96020 404 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 SREBF1P36956 1147 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 DSC3Q14574 896 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 ASTLQ6HA08 431 aaPredicted RBP15.17■□□□□ 0.02
COPS3-214ENST00000577246 ERMP1Q7Z2K6 904 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 CCDC60Q8IWA6 550 aaPredicted RBP15.17■□□□□ 0.02
COPS3-214ENST00000577246 POMKQ9H5K3 350 aa15.17■□□□□ 0.02
COPS3-214ENST00000577246 RBM28Q9NW13 759 aaKnown RBP15.17■□□□□ 0.02
COPS3-214ENST00000577246 C2orf71A6NGG8 1288 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 GPR32O75388 356 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 CA8P35219 290 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 ALDH7A1P49419 539 aaKnown RBP15.16■□□□□ 0.02
COPS3-214ENST00000577246 CLCN5P51795 746 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 GIT2Q14161 759 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 SWSAP1Q6NVH7 229 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 ASCL5Q7RTU5 278 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 SMAP1Q8IYB5 467 aaPredicted RBP15.16■□□□□ 0.02
COPS3-214ENST00000577246 ZDHHC14Q8IZN3 488 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 NKD2Q969F2 451 aaPredicted RBP15.16■□□□□ 0.02
COPS3-214ENST00000577246 FAM167AQ96KS9 214 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 PPP1R16BQ96T49 567 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 TBC1D22BQ9NU19 505 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 AKT3Q9Y243 479 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 USTQ9Y2C2 406 aa15.16■□□□□ 0.02
COPS3-214ENST00000577246 ZBTB42B2RXF5 422 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 IPO5O00410 1097 aaKnown RBP15.15■□□□□ 0.02
COPS3-214ENST00000577246 EOMESO95936 686 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 VTNP04004 478 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 PSAPP07602 524 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 SETQ01105 290 aaPredicted RBP15.15■□□□□ 0.02
COPS3-214ENST00000577246 ATAT1Q5SQI0 421 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 KIAA1841Q6NSI8 718 aa15.15■□□□□ 0.02
COPS3-214ENST00000577246 ZNF746Q6NUN9 644 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms