RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 DIAPH3Q9NSV4 1193 aa7.28□□□□□ -1.24
NUP88-212ENST00000576708 TRMT13Q9NUP7 481 aaKnown RBP7.28□□□□□ -1.24
NUP88-212ENST00000576708 ADD3Q9UEY8 706 aaKnown RBP7.28□□□□□ -1.24
NUP88-212ENST00000576708 ELOA3CA0A087WX78 387 aaPredicted RBP7.27□□□□□ -1.25
NUP88-212ENST00000576708 RBM47A0AV96 593 aaKnown RBP7.27□□□□□ -1.25
NUP88-212ENST00000576708 ELOA3DA6NLF2 546 aaPredicted RBP7.27□□□□□ -1.25
NUP88-212ENST00000576708 EREGO14944 169 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 OIP5O43482 229 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 CABYRO75952 493 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 ARIH2O95376 493 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 CPB1P15086 417 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 RABGGTBP53611 331 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 ELOA3BQ3SY89 546 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 RASIP1Q5U651 963 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 OTOP2Q7RTS6 562 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 ELOA3Q8NG57 546 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 PPM1EQ8WY54 764 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 ESR2Q92731 530 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 TIFAQ96CG3 184 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 DMRTB1Q96MA1 342 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 TAAR1Q96RJ0 339 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 NOC4LQ9BVI4 516 aaKnown RBP7.27□□□□□ -1.25
NUP88-212ENST00000576708 HIPK3Q9H422 1215 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 RNF41Q9H4P4 317 aaPredicted RBP7.27□□□□□ -1.25
NUP88-212ENST00000576708 ZNF576Q9H609 170 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 IL23AQ9NPF7 189 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 PRDM6Q9NQX0 595 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 ZSWIM5Q9P217 1185 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 COL20A1Q9P218 1284 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 SLC6A14Q9UN76 642 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 Q9Y3F1 56 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 WDR19Q8NEZ3 1342 aa7.27□□□□□ -1.25
NUP88-212ENST00000576708 ANKRD33BA6NCL7 494 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 ZEB2O60315 1214 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 FGBP02675 491 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 PCP11498 1178 aaKnown RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 MYOGP15173 224 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 AMPD1P23109 780 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 CES1P23141 567 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 EDNRBP24530 442 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 CHMP4BP1P59074 171 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 IRX6P78412 446 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 PURAQ00577 322 aaKnown RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 CDC37Q16543 378 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 QRICH1Q2TAL8 776 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 FAM47CQ5HY64 1035 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 PSRC1Q6PGN9 363 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 DNAJC14Q6Y2X3 702 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 FAM35AQ86V20 835 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 DGKHQ86XP1 1220 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 TICAM2Q86XR7 235 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 ADGRF4Q8IZF3 695 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 ENAHQ8N8S7 591 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 ZSCAN1Q8NBB4 408 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 SYTL5Q8TDW5 730 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 SNX29Q8TEQ0 813 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 HERVK_113Q902F9 699 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 MDFIQ99750 246 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 MTG1Q9BT17 334 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 ALDH8A1Q9H2A2 487 aaPredicted RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 NKX2-4Q9H2Z4 354 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 PRDM12Q9H4Q4 367 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 KAT14Q9H8E8 782 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 JMJD4Q9H9V9 463 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 NAGPAQ9UK23 515 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 YBX2Q9Y2T7 364 aaKnown RBP7.26□□□□□ -1.25
NUP88-212ENST00000576708 EYSQ5T1H1 3165 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 TNKSO95271 1327 aa7.26□□□□□ -1.25
NUP88-212ENST00000576708 TMEM265A0A087WTH1 108 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 ADARB2-AS1A8MUL3 147 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 TREHO43280 583 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 DHX16O60231 1041 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 TXNP10599 105 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 GSPT1P15170 499 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 EIF2AK2P19525 551 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 ALAS2P22557 587 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 MAPK8P45983 427 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 GPLD1P80108 840 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 PLCB3Q01970 1234 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 ADGRE1Q14246 886 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 DSC3Q14574 896 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 SUZ12Q15022 739 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 PPP2R5BQ15173 497 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 LY6KQ17RY6 165 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 SLC35G1Q2M3R5 365 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 GPATCH4Q5T3I0 446 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 SEPT14Q6ZU15 432 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 CYB5R4Q7L1T6 521 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 CHST3Q7LGC8 479 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 DEFB128Q7Z7B8 93 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 IQCA1Q86XH1 822 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 ANKS1AQ92625 1134 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 DSCC1Q9BVC3 393 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
NUP88-212ENST00000576708 TAF6LQ9Y6J9 622 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 A0A0C4DFX4 3053 aa7.25□□□□□ -1.25
NUP88-212ENST00000576708 UNC80Q8N2C7 3258 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 297.8 ms