RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-204	ENST00000573018	ZNHIT2	Q9UHR6	403 aa		5	□□□□□ -1.61
ERCC4-204	ENST00000573018	PCDHA8	Q9Y5H6	950 aa		5	□□□□□ -1.61
ERCC4-204	ENST00000573018	IQCA1L	A6NCM1	817 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	MASP2	O00187	686 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	LMNA	P02545	664 aa	Known RBP	4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	SEC23A	Q15436	765 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	ELAVL1	Q15717	326 aa	Known RBP	4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	GSPT2	Q8IYD1	628 aa	Known RBP	4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	PCDH19	Q8TAB3	1148 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	PGBD4	Q96DM1	585 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	RPL10L	Q96L21	214 aa	Known RBP	4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	MLST8	Q9BVC4	326 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	GPR87	Q9BY21	358 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	RIOX1	Q9H6W3	641 aa		4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.99	□□□□□ -1.61
ERCC4-204	ENST00000573018	PRAMEF22	A3QJZ6	481 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	ST5	P78524	1137 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	CRY1	Q16526	586 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	DDR2	Q16832	855 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	GAREM2	Q75VX8	874 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	DPH6	Q7L8W6	267 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	HIPK4	Q8NE63	616 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	NTN5	Q8WTR8	489 aa	Predicted RBP	4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	ASB15	Q8WXK1	588 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	ZNF764	Q96H86	408 aa	Predicted RBP	4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	SMURF1	Q9HCE7	757 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	MAGEL2	Q9UJ55	1249 aa		4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.98	□□□□□ -1.61
ERCC4-204	ENST00000573018	ZNF561-AS1	K7EIQ3	104 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	TRAF5	O00463	557 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	WNT9A	O14904	365 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	CLASP2	O75122	1294 aa	Known RBP	4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	DNM2	P50570	870 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	TM4SF20	Q53R12	229 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	ZKSCAN2	Q63HK3	967 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	C16orf59	Q7L2K0	433 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	GLCCI1	Q86VQ1	547 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	BCL6B	Q8N143	479 aa	Predicted RBP	4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	ZNF276	Q8N554	614 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	RBM8A	Q9Y5S9	174 aa	Known RBP	4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	XDH	P47989	1333 aa		4.97	□□□□□ -1.61
ERCC4-204	ENST00000573018	CCDC66	A2RUB6	948 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	SCD	O00767	359 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	AQP7	O14520	342 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	RHOBTB3	O94955	611 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	ADCY7	P51828	1080 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	GUCY1A3	Q02108	690 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	FSTL4	Q6MZW2	842 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	CISD2	Q8N5K1	135 aa	Known RBP	4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	ANKRD53	Q8N9V6	530 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	PROKR1	Q8TCW9	393 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	GBP4	Q96PP9	640 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	GPHA2	Q96T91	129 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	PACSIN3	Q9UKS6	424 aa		4.96	□□□□□ -1.62
ERCC4-204	ENST00000573018	UBE2QL1	A1L167	161 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	FGR	P09769	529 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	RBM25	P49756	843 aa	Known RBP	4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	C21orf58	P58505	322 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	BPIFB4	P59827	614 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	RABL3	Q5HYI8	236 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	KLHDC10	Q6PID8	442 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	FAM111B	Q6SJ93	734 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	ANKS3	Q6ZW76	656 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	SYNE4	Q8N205	404 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	MB21D1	Q8N884	522 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	SLC6A15	Q9H2J7	730 aa		4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	ADARB2	Q9NS39	739 aa	Known RBP	4.95	□□□□□ -1.62
ERCC4-204	ENST00000573018	KLRG2	A4D1S0	409 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	RASSF10	A6NK89	507 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	ZAR1L	A6NP61	321 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	GOLGA8B	A8MQT2	603 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	ARVCF	O00192	962 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	FOXP2	O15409	715 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	ZNF37A	P17032	561 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	NR4A1	P22736	598 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	APEX1	P27695	318 aa	Known RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	RABGGTB	P53611	331 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	RHOU	Q7L0Q8	258 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	PRIMA1	Q86XR5	153 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	ELOA2	Q8IYF1	753 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	LRRC47	Q8N1G4	583 aa	Known RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	ERCC4	Q92889	916 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	PTPRN2	Q92932	1015 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	GCDH	Q92947	438 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	LENG9	Q96B70	501 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	BBC3	Q96PG8	261 aa	Predicted RBP	4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	TRPS1	Q9UHF7	1281 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	PCDHA9	Q9Y5H5	950 aa		4.94	□□□□□ -1.62
ERCC4-204	ENST00000573018	GRID2IP	A4D2P6	1211 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	C2orf78	A6NCI8	922 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	H2AFY	O75367	372 aa	Known RBP	4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	ABHD16A	O95870	558 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	ADAM8	P78325	824 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	SMAD3	P84022	425 aa	Known RBP	4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	MAP3K12	Q12852	859 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	PTPA	Q15257	358 aa		4.93	□□□□□ -1.62

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