RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 FAM186BQ8IYM0 893 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 U2AF1L4Q8WU68 220 aaKnown RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 RPGRIP1Q96KN7 1286 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 KRT12Q99456 494 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 UNC45AQ9H3U1 944 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 HPCAL4Q9UM19 191 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 FRMD3A2A2Y4 597 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 TBX3O15119 743 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 ALAS1P13196 640 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 RPL13P26373 211 aaKnown RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 GUCY2FP51841 1108 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 CEP55Q53EZ4 464 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 TTC19Q6DKK2 380 aaPredicted RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 ALKBH5Q6P6C2 394 aaKnown RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 MOXD1Q6UVY6 613 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 GBP6Q6ZN66 633 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 MRIQ9BWK5 157 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 ZNF341Q9BYN7 854 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 PARVGQ9HBI0 331 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 TYW1Q9NV66 732 aaKnown RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 FEZ2Q9UHY8 353 aaPredicted RBP9.57□□□□□ -0.88
LINC00558-201ENST00000569422 CCPG1Q9ULG6 757 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 TMX2Q9Y320 296 aa9.57□□□□□ -0.88
LINC00558-201ENST00000569422 PDXKO00764 312 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 TGFB1I1O43294 461 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 LRRN2O75325 713 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 LCA5LO95447 670 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 MCM3P25205 808 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 GUCY2DQ02846 1103 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 TRADDQ15628 312 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 ZSCAN26Q16670 478 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 CFAP221Q4G0U5 840 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 ZFYVE27Q5T4F4 411 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 CHURC1Q8WUH1 139 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 SLC35C1Q96A29 364 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 HSD17B14Q9BPX1 270 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 LXNQ9BS40 222 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 NUCKS1Q9H1E3 243 aaKnown RBP9.56□□□□□ -0.88
LINC00558-201ENST00000569422 EPB41L5Q9HCM4 733 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 TRAF3IP3Q9Y228 551 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 ARHGEF35A5YM69 484 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 IPO5O00410 1097 aaKnown RBP9.56□□□□□ -0.88
LINC00558-201ENST00000569422 NFIBO00712 420 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 CEP104O60308 925 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 TUBBP07437 444 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 MYCLP12524 364 aaPredicted RBP9.56□□□□□ -0.88
LINC00558-201ENST00000569422 INPP5BP32019 993 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 USP8P40818 1118 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 NAB2Q15742 525 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 FRMD5Q7Z6J6 570 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 CACTIN-AS1Q8N1I8 211 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 TXLNBQ8N3L3 684 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 C7orf43Q8WVR3 580 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 TAF4BQ92750 862 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 ELMO3Q96BJ8 720 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 AP1M1Q9BXS5 423 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 WDR11Q9BZH6 1224 aa9.56□□□□□ -0.88
LINC00558-201ENST00000569422 HERC5Q9UII4 1024 aaKnown RBP9.56□□□□□ -0.88
LINC00558-201ENST00000569422 EXOC3O60645 756 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 SYF2O95926 243 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 GLI1P08151 1106 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CIITAP33076 1130 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 PRELPP51888 382 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 SP4Q02446 784 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 SLC15A2Q16348 729 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 IRF2BP2Q7Z5L9 587 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 ADAT2Q7Z6V5 191 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 FAM151AQ8WW52 585 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 EDEM3Q9BZQ6 932 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 RAVER2Q9HCJ3 691 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CHORDC1Q9UHD1 332 aaPredicted RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 NFU1Q9UMS0 254 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 GRID2IPA4D2P6 1211 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 ANKRD65E5RJM6 399 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 PJA2O43164 708 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 PSMD10O75832 226 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 HEXIM1O94992 359 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 EIF2AK2P19525 551 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 CARSP49589 748 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 MCCD1P59942 119 aaPredicted RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 PRPF4BQ13523 1007 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 BTNL9Q6UXG8 535 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 LEKR1Q6ZMV7 388 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 C1orf186Q6ZWK4 172 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 EPM2AIP1Q7L775 607 aaPredicted RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 HS2ST1Q7LGA3 356 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 GLYCTKQ8IVS8 523 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 IL31RAQ8NI17 732 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 FAM71BQ8TC56 605 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 POLR3CQ9BUI4 534 aaPredicted RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 VCPKMTQ9H867 229 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 AIPL1Q9NZN9 384 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 STIM2Q9P246 746 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 FZD1Q9UP38 647 aa9.55□□□□□ -0.88
LINC00558-201ENST00000569422 MRPL11Q9Y3B7 192 aaKnown RBP9.55□□□□□ -0.88
LINC00558-201ENST00000569422 ANKRD31Q8N7Z5 1873 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms