RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
CLK3-218ENST00000566926 PPME1Q9Y570 386 aa15.03■□□□□ -0
CLK3-218ENST00000566926 EML1O00423 815 aa15.02■□□□□ -0
CLK3-218ENST00000566926 GJB5O95377 273 aa15.02■□□□□ -0
CLK3-218ENST00000566926 NCLP19338 710 aaKnown RBP15.02■□□□□ -0
CLK3-218ENST00000566926 ATP2B1P20020 1258 aa15.02■□□□□ -0
CLK3-218ENST00000566926 MCM7P33993 719 aa15.02■□□□□ -0
CLK3-218ENST00000566926 DNM2P50570 870 aa15.02■□□□□ -0
CLK3-218ENST00000566926 DEFB103AP81534 67 aa15.02■□□□□ -0
CLK3-218ENST00000566926 CDC42EP1Q00587 391 aa15.02■□□□□ -0
CLK3-218ENST00000566926 DNM1Q05193 864 aaKnown RBP15.02■□□□□ -0
CLK3-218ENST00000566926 TMEM62Q0P6H9 643 aa15.02■□□□□ -0
CLK3-218ENST00000566926 OTUD6AQ7L8S5 288 aa15.02■□□□□ -0
CLK3-218ENST00000566926 C4orf19Q8IY42 314 aa15.02■□□□□ -0
CLK3-218ENST00000566926 MYOCDQ8IZQ8 938 aa15.02■□□□□ -0
CLK3-218ENST00000566926 BANK1Q8NDB2 785 aa15.02■□□□□ -0
CLK3-218ENST00000566926 NEK9Q8TD19 979 aa15.02■□□□□ -0
CLK3-218ENST00000566926 CDX2Q99626 313 aaPredicted RBP15.02■□□□□ -0
CLK3-218ENST00000566926 RAD9AQ99638 391 aa15.02■□□□□ -0
CLK3-218ENST00000566926 ZSWIM4Q9H7M6 989 aa15.02■□□□□ -0
CLK3-218ENST00000566926 TTC12Q9H892 705 aaPredicted RBP15.02■□□□□ -0
CLK3-218ENST00000566926 AKT3Q9Y243 479 aa15.02■□□□□ -0
CLK3-218ENST00000566926 YBX2Q9Y2T7 364 aaKnown RBP15.02■□□□□ -0
CLK3-218ENST00000566926 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 BMP15O95972 392 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 TXKP42681 527 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 CRYBB1P53674 252 aaPredicted RBP15.01□□□□□ -0.01
CLK3-218ENST00000566926 PAK2Q13177 524 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 TARBP2Q15633 366 aaKnown RBP15.01□□□□□ -0.01
CLK3-218ENST00000566926 TCTN1Q2MV58 587 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 TTC38Q5R3I4 469 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 MTMR9Q96QG7 549 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 GAS2L1Q99501 681 aaPredicted RBP15.01□□□□□ -0.01
CLK3-218ENST00000566926 ANP32EQ9BTT0 268 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 SUGCTQ9HAC7 445 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
CLK3-218ENST00000566926 GINS2Q9Y248 185 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 INSL6Q9Y581 213 aa15.01□□□□□ -0.01
CLK3-218ENST00000566926 GPR182O15218 404 aa15□□□□□ -0.01
CLK3-218ENST00000566926 RPS6KA5O75582 802 aa15□□□□□ -0.01
CLK3-218ENST00000566926 YEATS4O95619 227 aa15□□□□□ -0.01
CLK3-218ENST00000566926 MBD3O95983 291 aa15□□□□□ -0.01
CLK3-218ENST00000566926 CA3P07451 260 aa15□□□□□ -0.01
CLK3-218ENST00000566926 CD52P31358 61 aa15□□□□□ -0.01
CLK3-218ENST00000566926 CLCN3P51790 818 aa15□□□□□ -0.01
CLK3-218ENST00000566926 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
CLK3-218ENST00000566926 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
CLK3-218ENST00000566926 ZNF174Q15697 407 aa15□□□□□ -0.01
CLK3-218ENST00000566926 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.01
CLK3-218ENST00000566926 KCNG4Q8TDN1 519 aa15□□□□□ -0.01
CLK3-218ENST00000566926 TOP1MTQ969P6 601 aa15□□□□□ -0.01
CLK3-218ENST00000566926 LXNQ9BS40 222 aa15□□□□□ -0.01
CLK3-218ENST00000566926 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
CLK3-218ENST00000566926 PADI3Q9ULW8 664 aa15□□□□□ -0.01
CLK3-218ENST00000566926 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 STBD1O95210 358 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 VTNP04004 478 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 MYOGP15173 224 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 GRIN2CQ14957 1233 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 ANO5Q75V66 913 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 LINC01465Q8N7H1 131 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 SLC7A3Q8WY07 619 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 DYDC2Q96IM9 177 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 SPATA32Q96LK8 384 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
CLK3-218ENST00000566926 AGO3Q9H9G7 860 aaKnown RBP14.99□□□□□ -0.01
CLK3-218ENST00000566926 CYP26B1Q9NR63 512 aa14.99□□□□□ -0.01
CLK3-218ENST00000566926 MORC2Q9Y6X9 1032 aaPredicted RBP14.99□□□□□ -0.01
CLK3-218ENST00000566926 RALGAPA2Q2PPJ7 1873 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 IGKV6-21A0A0C4DH24 114 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 LAD1O00515 517 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 WNT7AO00755 349 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 ENPP3O14638 875 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 GPR32O75388 356 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 MAFO75444 373 aaPredicted RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 SLITRK3O94933 977 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 LYPLA2O95372 231 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 FOSL2P15408 326 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 YWHABP31946 246 aaKnown RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 RFC5P40937 340 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 NASPP49321 788 aaPredicted RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 UBE2HP62256 183 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 NFX1Q12986 1120 aaKnown RBP14.98□□□□□ -0.01
CLK3-218ENST00000566926 KIZQ2M2Z5 673 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 FAM117BQ6P1L5 589 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 TPH2Q8IWU9 490 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 ERMNQ8TAM6 284 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 MYLIPQ8WY64 445 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 YME1L1Q96TA2 773 aa14.98□□□□□ -0.01
CLK3-218ENST00000566926 RAB34Q9BZG1 259 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms