RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 KMT5BQ4FZB7 885 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 SLC9C1Q4G0N8 1177 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 PRAMEF19Q5SWL8 479 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 C1orf186Q6ZWK4 172 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 KCNK18Q7Z418 384 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 DHX40Q8IX18 779 aaKnown RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 GRAMD1CQ8IYS0 662 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 ARRDC4Q8NCT1 418 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 COPS5Q92905 334 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 MTRQ99707 1265 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 TSG101Q99816 390 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 UPF3AQ9H1J1 476 aaKnown RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 ZHX3Q9H4I2 956 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 XPNPEP3Q9NQH7 507 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 OLFML3Q9NRN5 406 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 IMPACTQ9P2X3 320 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 DDX20Q9UHI6 824 aaKnown RBP10.87□□□□□ -0.67
SF3B3-207ENST00000566095 RWDD2AQ9UIY3 292 aa10.87□□□□□ -0.67
SF3B3-207ENST00000566095 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 FRMD3A2A2Y4 597 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 BIN1O00499 593 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 ASAP2O43150 1006 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 INHAP05111 366 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 CST5P28325 142 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 PSMC6P62333 389 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 EHHADHQ08426 723 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 COASYQ13057 564 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 GIT2Q14161 759 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 TFDP1Q14186 410 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 MXD4Q14582 209 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 NCAPHQ15003 741 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 EMC2Q15006 297 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 UGCGQ16739 394 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 TPD52L1Q16890 204 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 MTERF2Q49AM1 385 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 GNASQ5JWF2 1037 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 FAM102BQ5T8I3 360 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 MAP3K21Q5TCX8 1036 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 SPATA1Q5VX52 437 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 LUZP1Q86V48 1076 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 MYCT1Q8N699 235 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 RNF214Q8ND24 703 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 ANKRD20A12PQ8NF67 263 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 STAMQ92783 540 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 HVCN1Q96D96 273 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-207ENST00000566095 EXOC7Q9UPT5 735 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 PTPN22Q9Y2R2 807 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 PCDHB13Q9Y5F0 798 aa10.86□□□□□ -0.67
SF3B3-207ENST00000566095 NRCAMQ92823 1304 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 MOXD2PA6NHM9 499 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 FOXN1O15353 648 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 EIF3DO15371 548 aaKnown RBP eCLIP10.85□□□□□ -0.67
SF3B3-207ENST00000566095 KLRC4O43908 158 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ZNF862O60290 1169 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 HIP1RO75146 1068 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ADCY5O95622 1261 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 F2P00734 622 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 TPM2P07951 284 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 MYL3P08590 195 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 PLS3P13797 630 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ELNP15502 786 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ZNF18P17022 549 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 BMP6P22004 513 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ZNF131P52739 623 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 PPFIA1Q13136 1202 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 PLCB4Q15147 1175 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ODR4Q5SWX8 454 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 IER5Q5VY09 327 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 ANO5Q75V66 913 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 FAM114A1Q8IWE2 563 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 FAM178BQ8IXR5 827 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 MYOCDQ8IZQ8 938 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 GUF1Q8N442 669 aaKnown RBP10.85□□□□□ -0.67
SF3B3-207ENST00000566095 DNAJC5GQ8N7S2 189 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 GOLGA5Q8TBA6 731 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 DNAJC19Q96DA6 116 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 MAP7D2Q96T17 732 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 TSEN34Q9BSV6 310 aaKnown RBP10.85□□□□□ -0.67
SF3B3-207ENST00000566095 RUSC1Q9BVN2 902 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 C2orf40Q9H1Z8 148 aa10.85□□□□□ -0.67
SF3B3-207ENST00000566095 MRPL44Q9H9J2 332 aaKnown RBP10.85□□□□□ -0.67
SF3B3-207ENST00000566095 CGNQ9P2M7 1197 aaKnown RBP10.85□□□□□ -0.67
SF3B3-207ENST00000566095 WRAP73Q9P2S5 460 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-207ENST00000566095 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 KBTBD13C9JR72 458 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 MARK3P27448 753 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 SNRPFP62306 86 aaKnown RBP10.84□□□□□ -0.67
SF3B3-207ENST00000566095 LRRC63Q05C16 580 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 PAK1Q13153 545 aa10.84□□□□□ -0.67
SF3B3-207ENST00000566095 MFSD10Q14728 455 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms